Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4484 ATGTTGTTCATCCCTTTCCTTAAACATTGTCCATGCGTGCTTTTGTTCCTCTTGTTTACGCTGTTTTACACTTCAACAGAAGCTTATGATCCACTTGACCCACATGGAAATATCACAATCAAATGGGATATTATAAGTTGGACACCCGATGGTTATGTTGCTGTTGTTACAATGAACAACTTCCAACGTTATCGTCATATATCGGCACCTGGATGGTCATTAGGATGGAATTGGGCAAATAAAGAGGTAATATGGGCCATGGTGGGAGGTCAGGCAACTGAACAAGGAGATTGTTCGAAATTTAAAGGAACCATCCCACATTGCTGTAAAGAACATCCAACGGTCATAGATTTACCTCCTGGGACGCCTTATAATCAACAAATTGCAAATTGTTGCAGAGGCGGTGTTCTCAGTGCATGGGAACAGGATCCAATAAATGCGGTTTCAGCATTTCAAGTCAGCGTCGGTAGAGCTGGTACAACTAACAAAACTGTCAAACTGCCGAGAAATTTCACCTTGAAAGCACCTGGACCAGGTTATACTTGTGGGCCAGCAAAAATAGTGAAACCTACTAGATTCATAACACCAGACAAAAGGAGAGTGACTCAAGCACTTATGACATGGAATGTGATATGCACATATTCACAATTTCTAGCTCCGAAAACTCCAACTTGCTGTGTCGCCCTCTCATCATTCTATAATGATACTATCGTACCCTGCCCGATATGTTCATGCGGCTGCCAAGGCATCTCAGCTCAATCAGGAAGCTGTATAGATCCAAGTGAGCCGCATTTGGCCTCGGCTGTTAACAGCTTTCCAAAGAATAGTAGTACGCCTTTGGAGTATTGGCGCGTAAAGGTCACTATTACTAATTTAAACTACAGGTTGAATTACTCAGATTGGAACTTGGTTGTTCAACATCCAAACTTTTACAATCTGACTCAACTCTTCAGTTTCAACTACAAATCAATAACTCCCTACGGGTCGATAAATGATACAACAATGCTTTGGGGAGTTAAATTCTACAATGATTTACTCATGCAAGCTGGTCCTATTGGTAATGTACAATCAGAGCTACTTTTCCGAAAGGATTCGAAATTTACTTTCGATAAAGGTTGTGCTTTTCCCCGGAGGATCTATTTCAATGGCGACAACTGTGTGATGCCACCACCTGACTCGTATCCATGGTTGCCTTATGCATGA 1203 0.4181 MLFIPFLKHCPCVLLFLLFTLFYTSTEAYDPLDPHGNITIKWDIISWTPDGYVAVVTMNNFQRYRHISAPGWSLGWNWANKEVIWAMVGGQATEQGDCSKFKGTIPHCCKEHPTVIDLPPGTPYNQQIANCCRGGVLSAWEQDPINAVSAFQVSVGRAGTTNKTVKLPRNFTLKAPGPGYTCGPAKIVKPTRFITPDKRRVTQALMTWNVICTYSQFLAPKTPTCCVALSSFYNDTIVPCPICSCGCQGISAQSGSCIDPSEPHLASAVNSFPKNSSTPLEYWRVKVTITNLNYRLNYSDWNLVVQHPNFYNLTQLFSFNYKSITPYGSINDTTMLWGVKFYNDLLMQAGPIGNVQSELLFRKDSKFTFDKGCAFPRRIYFNGDNCVMPPPDSYPWLPYA* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4484 400 PIRSF COBRA 280 400 IPR006918 GO:0010215|GO:0031225
Mal6g4484 400 PIRSF COBRA 1 281 IPR006918 GO:0010215|GO:0031225
Mal6g4484 400 PANTHER PROTEIN COBRA 7 280 IPR006918 GO:0010215|GO:0031225
Mal6g4484 400 PANTHER PROTEIN COBRA 281 399 IPR006918 GO:0010215|GO:0031225
Mal6g4484 400 PANTHER COBRA-LIKE PROTEIN 281 399 - -
Mal6g4484 400 PANTHER COBRA-LIKE PROTEIN 7 280 - -
Mal6g4484 400 Pfam COBRA-like protein 52 215 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4484 Mal-Chr6 128102000 128105946 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4484 14 398 COBRA Gene Family AT3G02210 71.814 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4484 - - gmx:100783820 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4484 6 128102000 128105946 Mal6g4484 6 128102000 128105946 ECH
Mal3g0411 3 15403195 15407074 Mal6g4484 6 128102000 128105946 PCT