Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4483 ATGTTGTTCTTCCCTTTCCTTAAACATTGTCCATGCATGGTTCTGTTCCTCATGTTTACACTGTTCTACACTTCAACAGAAGCTTATGATCCACTTGACCCAAATGGAAATATCACAATCAAATGGGATATTATGAGCTGGACAGCTGATGGTTATGTTGCCATGGTTACAATGAACAACTTCCAACAGTATCGTCATATATCGGCACCTGGATGGTCATTAGGATGGACATGGGCAAAGAAAGAGGTAATATGGGTCATGATGGGAGGTCAGGCAACTGAACAAGGAGATTGTTCGAAATTTAAAGGAAACATCCCGCATTGCTGTAAAAAAGATCCAACGGTCGTAGATTTACTTCCCGGAACGCCTTATAATCAACAAGTTGCAAATTGTTGCAAAGGTGGAGTACTCAGCTCATGGGCACAGGATCCAACAAACGCGGTTGCGTCATTTCAGGTTAGCGTTGGTAGAGCTGGCACAACTAACAAAACTGTCAGACTTCCGCAAAATTTCACCCTGAACGCACCTGGACCAGGTTATACATGTGGAAAAGCAAAAATTGTGACACCTACTACATTTACAACACCAGACAAAAGGAGAGTGACTCAAGCACTTATGACATGGAATGTGACATGCACATATTCACAATTTCTAGCTCAGAAAACTCCAACTTGCTGTGTCGCCCTCTCATCATTCTATAACGAACATATCGTACCCTGCCCGACATGTTCGTGTGGCTGCCAGGGCAACTCACCTCAATCAGGAAGCTGTGTAGATCCAAGTGCGCCGCATTTAGCCTCGGTTGTTAACGGCTTTCCGAAGAATAGTATTACACCTTTGGTTCGATGTACTAGTCATATGTGTCCAATCCGAGTTCACTGGCACATTAAGCTTAACTACAAGGAGTATTGGCGCGTAAAGGTCACTATTACTAACTTCAATTACAGGATGAATTACTCAGATTGGAACTTGGTTGTTCAACATCCAAACTTTGACAATCTGACTCAACTTTTCAGTTTCAACTCCAAACCAATAACTCCCTACGGATCGATAAGATATTGTTCTCGTGCAATCGCGGAGATTATTTAA 1089 0.4252 MLFFPFLKHCPCMVLFLMFTLFYTSTEAYDPLDPNGNITIKWDIMSWTADGYVAMVTMNNFQQYRHISAPGWSLGWTWAKKEVIWVMMGGQATEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQVANCCKGGVLSSWAQDPTNAVASFQVSVGRAGTTNKTVRLPQNFTLNAPGPGYTCGKAKIVTPTTFTTPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVALSSFYNEHIVPCPTCSCGCQGNSPQSGSCVDPSAPHLASVVNGFPKNSITPLVRCTSHMCPIRVHWHIKLNYKEYWRVKVTITNFNYRMNYSDWNLVVQHPNFDNLTQLFSFNSKPITPYGSIRYCSRAIAEII* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4483 362 Pfam COBRA-like protein 52 215 IPR006918 GO:0010215|GO:0031225
Mal6g4483 362 PANTHER COBRA-LIKE PROTEIN 7 352 - -
Mal6g4483 362 PIRSF COBRA 2 356 IPR006918 GO:0010215|GO:0031225
Mal6g4483 362 PANTHER PROTEIN COBRA 7 352 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4483 Mal-Chr6 128060745 128087263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4483 14 351 COBRA Gene Family AT3G02210 75.221 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4483 - - gmx:100783820 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4483 6 128060745 128087263 Mal6g4483 6 128060745 128087263 ECH
Mal6g4483 6 128060745 128087263 Mal3g0411 3 15403195 15407074 PCT
Mal3g0412 3 15407971 15411465 Mal6g4483 6 128060745 128087263 PCT