Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4474 ATGGGTTCTGTTTGTTGTTGTTTGAGCTTTGATGATTATGAAGATTATGTAAATCCAAATAGTCCTGTATATAGGAACTGTGTGTGTTTCAGTTGCTTGGTACAGAACCTTTTGAATGTGTATGCATCAATATTTCGTAGAGGGGAAGCGCATTCAGTTCCTTCTTCTCTTCAGGGAACAGCATCCATGACATCTGCAGCATCACTTGATAATTCTCTATCTGACATGTACCGTTCTCCACCAAGGCCTTTACCTTATGATGCAGAGCCTCGGTTTTTCCGCTCACAACGTGATGGACTAGTTTCAAGGCGTGAGAAAAGTTCAAGTCATTCAAATGATGAAACTGAACCTCTAAGAAGTGATGCAGATGTGGATCCAGAACCTTTAAATTCAGCAGACAAATGGAATGAATGTGCCTGTGAAGATGAATCAAAGATATACCGTTCTAAGTCCGCATTAAGACTTTCATCAGCAAAATATACAACTGGAGTTGGACTCATTTATGCGTCATCGGAAGACGAGGATATTTGTCCAACTTGTCTTGAAGAGTACACTAAAGAGAATCCGAAGATAATGACAAAATGCTCTCATCATTTTCACCTTGGTTGTATCTACGAGTGGATGGAGAGAAGTGATAACTGTCCAGTTTGTGGAAAGGAAATGGAATTCGATGAAACGACTTACTCTTGA 690 0.3986 MGSVCCCLSFDDYEDYVNPNSPVYRNCVCFSCLVQNLLNVYASIFRRGEAHSVPSSLQGTASMTSAASLDNSLSDMYRSPPRPLPYDAEPRFFRSQRDGLVSRREKSSSHSNDETEPLRSDADVDPEPLNSADKWNECACEDESKIYRSKSALRLSSAKYTTGVGLIYASSEDEDICPTCLEEYTKENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKEMEFDETTYS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4474 229 ProSiteProfiles Zinc finger RING-type profile. 177 217 IPR001841 -
Mal6g4474 229 MobiDBLite consensus disorder prediction 98 129 - -
Mal6g4474 229 SMART ring_2 177 217 IPR001841 -
Mal6g4474 229 Pfam RING-H2 zinc finger domain 174 217 IPR024766 GO:0008270
Mal6g4474 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 226 IPR013083 -
Mal6g4474 229 SUPERFAMILY RING/U-box 172 224 - -
Mal6g4474 229 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 226 - -
Mal6g4474 229 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4474 Mal-Chr6 127799138 127803382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4474 1 226 C3H Transcription Factor Family AT5G15790 58.442 8.75e-92 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4474 - - gmx:100777068 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4474 6 127799138 127803382 Mal6g4474 6 127799138 127803382 ECH