Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4444 ATGGAAACTGACCCAACTGGACGCTATGCCAGGGTTGGAGATATTCTTGGAAAAGGGGCAATGAAAACAGTGTATAAAGCAATTGATAAGGTCCTTGGAATAGAGGTAGCATGGAACCAAGTCAAACTCAATGAAGCACTACGTACACCAGAGGACTTGGAAAGGCTATATTTAGAGGTTTATCTCCTTAGTAACCTCAAACATCAATCCATCATGCAATTCTATACCTCGTGGATTGATGTCGACAACAGGACATTCAACTTCATTACAGAAATGTTCACTTCTGGAACACTTAGAGAATACAGGAAGAAATATAAGCATGTAGGGATGCAAGCAATCAAGAGTTGGGCTCGCCAAATCTTACACGGTCTTGTTTATCTGCATGAGCATGATCCTCCGGTAATGCATAGGGACCTCAAATGTGATAACATATTTGTCAATGGTCATCTTGGACAAGTGAAAATTGGTGATCTAGGACTAGCAGCGATTCTTCGGGGTTCGCAGCCGGCACACAGTGTTATAGGAACCCCGGAGTTCATGGCACCAGAGTTGTACGAAGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTTTGGAAATTATTACATCCGACTATCCATATAGTGAGTGTACTAATCCGGCACAGATATATAAGAAAGTGACATCGGGTAAGCTACCAGAAACACTTTTCCGGATTGAAGATGCAGAAGCACGGGAGTTTATTGGAAAATGCCTAGTAAATGCCGCAAATAGACCATCGGCAAAAGAATTATTGCATGATCCATTTCTTGTGTCCGATGATGAATCATCGGTAACAATGATTGGGATGCATGATCCATTTTTAAATTACACTGAGATGGATGAACTTCAATTGAGGAGCGATTCAGCTAGGACTTCAATGTCAATAACTGGGAAGCTGAAACCCGAAGATGATGCTATCTCTCTCAAAGTGCAAATTGCTGACAAGAATGGGTCTGCTAGGAATGTATATTTTCCATTTGATATTTTCACCGACACTCCAATTGATGTTGCAAAGGAGATGGTGAAAGAGTTGGACATCACTGATTGGGATCCTTCTGAAATTGCTTCTATGATTGAAGCGGAGATATCCATGCTACTTCCAGATAGGACAAACAGTTATCATGATGATGATGAGAATGATGAATGTCCTCATCAATATCATCATTTTCCCTCCGTCTCTTCATGTTCGTCGTCGCAAGAATCATTGTCGGGTGCAATCAATAGAGCTGAAGACGTATCAAATGGACATCGTTGGGACCACGATGATATGTTCGACGATGGAAACTCGCGATCCTCTTCACACGCGACATATTCCGATTTGAATTTTTCTCCTGTGGACGACCAATATCACAACGTGGCTTCTACAAGAAATTATAAACATCCCATAATGAGTGACAAGTGTACAAGGTTTTCACATGGTGAAGAACAACTCACTTTGAACTGGTGCAAAGTTTTAGATAGACCACAAGAACCTTCTACAAGTGAAAGTGAGAGGATAATAGAGAATCAAATATTAACGAGGAACAAGTCATTAGTTGGTATGAGGAGCCAATTGCTAGATCGATCACTCGTTGAAGAGGTAAACAAAAGACGGTTATTGAAGACAGTTAGAGCTGTGGAAGATATTGGATACCAAACACCTTATGTGATTGCAAGCAAAAAGTCACAGCCAGTAAGTATGTAG 1719 0.4078 METDPTGRYARVGDILGKGAMKTVYKAIDKVLGIEVAWNQVKLNEALRTPEDLERLYLEVYLLSNLKHQSIMQFYTSWIDVDNRTFNFITEMFTSGTLREYRKKYKHVGMQAIKSWARQILHGLVYLHEHDPPVMHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEIITSDYPYSECTNPAQIYKKVTSGKLPETLFRIEDAEAREFIGKCLVNAANRPSAKELLHDPFLVSDDESSVTMIGMHDPFLNYTEMDELQLRSDSARTSMSITGKLKPEDDAISLKVQIADKNGSARNVYFPFDIFTDTPIDVAKEMVKELDITDWDPSEIASMIEAEISMLLPDRTNSYHDDDENDECPHQYHHFPSVSSCSSSQESLSGAINRAEDVSNGHRWDHDDMFDDGNSRSSSHATYSDLNFSPVDDQYHNVASTRNYKHPIMSDKCTRFSHGEEQLTLNWCKVLDRPQEPSTSESERIIENQILTRNKSLVGMRSQLLDRSLVEEVNKRRLLKTVRAVEDIGYQTPYVIASKKSQPVSM* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4444 572 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Mal6g4444 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Mal6g4444 572 Gene3D Transferase(Phosphotransferase) domain 1 93 276 - -
Mal6g4444 572 SUPERFAMILY Protein kinase-like (PK-like) 11 307 IPR011009 -
Mal6g4444 572 PANTHER WNK KINASE 6 571 - -
Mal6g4444 572 MobiDBLite consensus disorder prediction 424 440 - -
Mal6g4444 572 MobiDBLite consensus disorder prediction 401 420 - -
Mal6g4444 572 MobiDBLite consensus disorder prediction 383 397 - -
Mal6g4444 572 MobiDBLite consensus disorder prediction 383 447 - -
Mal6g4444 572 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 571 - -
Mal6g4444 572 ProSiteProfiles Protein kinase domain profile. 10 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g4444 572 Gene3D - 294 384 - -
Mal6g4444 572 SMART serkin_6 10 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g4444 572 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4444 Mal-Chr6 127110734 127114040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4444 1 565 MAP Kinase Kinase Kinase AT5G58350 57.968 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mal6g4444 Pkinase 6.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4444 K08867 - gmx:100778102 829.706