Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4436 ATGTCTCGCTATTCCTCTTCAAATCCCTTCGCAACAACAACTTGCACACTATATTCCGATTCGGACACCGATTCACTGAGTCAATTCGTCACCGATCTCTACGAAAATCGTTCCCCCACCGACCCACCTTGTCCTTGGGACGATGAAGATGAGGAAGATGATACACGCATAAACCCTTTTTCCAACATCGTTGATTTTCATCAAGGTGAGCCAGAATTAGGGTTAGAGTTAGGGTTTGGTGGTGAATATGAATATGAATATGAAACTCAATATAATGATGATAATTATGATGAGGTTTTTGATTGTTCTTCATTGGTTGGTGGTGGTGGTGATGGTAATTCTGGTGGGCTTAGGGTTGTTGAATTCGGTACCGATTCGGAGTCGAGTGGGAATGATGAGGAATTTAATTATGGTGGGGAGAATGATGATGAGAGGGTTGGTGAGTTGTGTTGGGATAGTCTTTGTTTGGAGGATCATAGGAGTGTTTTGAATGATTGGGAGGAAGTTGTAGAAGAGAGGGTTGATGAGAATGAGAATGAAAATGAAGAAGATTCTTCTAGTTTGTTGATTGATGAGCTTGAGGTTGATACTGAAGATGAGGCTGAGATTAATGGTCGAGGTCGATCGGTGGAGTCGCGGTTCGAGGAGGAAGAAGATGAAGCGGGAGAAGAGGCGTTGAGGTATTTGGAATGGGAGATTTTATTGGCTTTTAATAATTTAGAGAGGAATGGTGGATTGGAACATGAAGATGAGAGTTTGAATAATTTGTATTTAGCTGTTCATGATGGGATTATGTCGGGGAATACGGATTATGATGTTCTTTTCGGACAGTTATTGGAGAATGAGAGTGGTTTGAAGGGTAGTCCACCGGCCGCGAAGAGTTTCGTTGAGAATTTACCGTTGGTGGAATTGACTGAGGAGGAGTTGAAAGAGAAGGATGTTGTGTGTGCTGTTTGTAAAGACGAGGTAACTGTGGAAGAGGAGGTGAGGAAGTTGCCTTGCTCACATTGTTACCATGGAGATTGTATTTTGCCGTGGTTGAATATTCGAAATACTTGTCCTGTTTGTCGGTATGAGTTGCCAACGGATGATGATGATTACGAGCAGAGTAAGGTTCGTAGGGTGGCTCGTGATCTGTTGGAGTTTGCAACATAG 1155 0.4277 MSRYSSSNPFATTTCTLYSDSDTDSLSQFVTDLYENRSPTDPPCPWDDEDEEDDTRINPFSNIVDFHQGEPELGLELGFGGEYEYEYETQYNDDNYDEVFDCSSLVGGGGDGNSGGLRVVEFGTDSESSGNDEEFNYGGENDDERVGELCWDSLCLEDHRSVLNDWEEVVEERVDENENENEEDSSSLLIDELEVDTEDEAEINGRGRSVESRFEEEEDEAGEEALRYLEWEILLAFNNLERNGGLEHEDESLNNLYLAVHDGIMSGNTDYDVLFGQLLENESGLKGSPPAAKSFVENLPLVELTEEELKEKDVVCAVCKDEVTVEEEVRKLPCSHCYHGDCILPWLNIRNTCPVCRYELPTDDDDYEQSKVRRVARDLLEFAT* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4436 384 CDD RING-H2_RNF126_like 316 357 - -
Mal6g4436 384 ProSiteProfiles Zinc finger RING-type profile. 316 357 IPR001841 -
Mal6g4436 384 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 2 383 - -
Mal6g4436 384 SUPERFAMILY RING/U-box 303 364 - -
Mal6g4436 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 279 363 IPR013083 -
Mal6g4436 384 MobiDBLite consensus disorder prediction 32 56 - -
Mal6g4436 384 Pfam Ring finger domain 316 357 IPR001841 -
Mal6g4436 384 Coils Coil 163 183 - -
Mal6g4436 384 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 2 383 - -
Mal6g4436 384 SMART ring_2 316 356 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4436 Mal-Chr6 126918522 126919676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4436 231 371 C3H Transcription Factor Family AT3G02340 50.993 7.82e-47 163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4436 6 126918522 126919676 Mal6g4436 6 126918522 126919676 ECH