Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4435 ATGCAAACAAGAGAAGTAACAACAGGACTCAATTACATGCTTCCATCAAATACATCACCTTATCTACAAAACTATAACAACATGATTCAAAACAATAACATTTCCTCATATCAACTCCAAAAATTCTCAAACCAATTATATGGTAATTACCAAAACACCCCTCATCAACAATTTCCTGACTTCAACTACAGTCCACAATCATCATGCATAAGCAGCAACTCAACTTCTGATGAAGCAGATGAACAAAACCTTAGTCTCATTAATGAGAGGAAACACAGAAGGATGATATCAAACCGAGAATCTGCGCGCCGATCACGCATGAGGAAGCAGAAACACCTTGATGAGCTTTGGTCACAGGTTCTTTGGCTAAGGAATGAGAATCACCAACTTATAGAGAAACTTAACCATGTTTCTGAGAATCATGATCAAGTTGTTCAAGAGAATGTTCAGCTGAAAGAAGAAGCTTTGGAACTTAGACAAATGATAAAAGACATGCAGATTCATAGTCCTTTAATCCCTTCTTTTAGTCCTTTTGATGATACATATCTTAGAGATGATTCTTCAAACAATTCCATCTCAAGTTCAATGGATCTTCTTGGCTAA 603 0.3632 MQTREVTTGLNYMLPSNTSPYLQNYNNMIQNNNISSYQLQKFSNQLYGNYQNTPHQQFPDFNYSPQSSCISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIEKLNHVSENHDQVVQENVQLKEEALELRQMIKDMQIHSPLIPSFSPFDDTYLRDDSSNNSISSSMDLLG* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4435 200 SMART brlzneu 86 150 IPR004827 GO:0003700|GO:0006355
Mal6g4435 200 Coils Coil 134 168 - -
Mal6g4435 200 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 200 IPR044521 -
Mal6g4435 200 CDD bZIP_plant_GBF1 91 142 IPR045314 GO:0003700|GO:0006355
Mal6g4435 200 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 93 108 IPR004827 GO:0003700|GO:0006355
Mal6g4435 200 Pfam bZIP transcription factor 90 142 IPR004827 GO:0003700|GO:0006355
Mal6g4435 200 Gene3D - 88 143 - -
Mal6g4435 200 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 88 151 IPR004827 GO:0003700|GO:0006355
Mal6g4435 200 SUPERFAMILY Leucine zipper domain 90 140 IPR046347 GO:0003700|GO:0006355
Mal6g4435 200 PANTHER BZIP TRANSCRIPTION FACTOR 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4435 Mal-Chr6 126813407 126814009 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4435 65 183 bZIP Transcription Factor Family AT3G30530 69.672 1.97e-50 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal6g4435 bZIP_1 3.8e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4435 6 126813407 126814009 Mal3g0485 3 17962996 17963574 PCT