Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4424 ATGAAGATGTTAAGAAGAGAAGTTTTACTATGTTTTGTGACATTGTTCTTGTTTTGGAGTTGTACAAATGCTTTGCTTTCTCCTAAGGGAATAAACTTTGAAGTGCAAGCTTTAGTGAGTATAAAAGCTTCATTAATGGATCCTCATGGAATTTTTGAAGATTGGGATGGTGATGCTGTTGATCCATGTAGTTGGAATATGGTGACTTGTTCTCCTGAGACTCTTGTTGTTGGCTTGGGGATTCCTAGTCAAAATTTGTCTGGTACATTATCTCCAAGCATAGGAAACTTAACCAATCTTAAGACAGTTGTGTTACAGAATAACAATATTACTGGACCAATCCCTTCAGAGCTAGGAAAACTTTCCATGCTTCAAACACTTGATCTCTCTGATAACATCTTCAATGGAAAAATTCCTCCTTCTCTTGGTCATCTAAGAAACCTTCAGTACTTGAGGCTTAATAATAACAGTTTTTCTGGTGAATGTCCTGAGTCACTAGCTAACATGGCACAGCTTGCTTTTCTTGACTTATCATTCAACAATCTTACTGGCAATGTGCCTAGAATTTTGGCCAAATCATTCAGTATTGTTGGAAACCCTCTGGTATGTGCAACAGAAAAAGAAACAAACTGCCATGGGATGAAACTCATGCCTATGTCAATGAACTTAAACAATACAAACTATGTATTACCATCAAGAAGAACAAAAGCTCACAAAATGGCCATTATCTTTGGTTTAAGTCTTGGATGCCTTTGTTTGTTAGTCCTTGGTTTTGGATTTATTCTATGGAGGAGGCATAAACATAATCAACAAGCATTCTTTGATGTTAAAGACCGAAATCACGAAGAAGTCTACCTTGGAAACTTGAAGAGGTTCCCATTAAGAGAACTCCAGATTGCTACTCACAACTTCAGCAACAAGAACATATTGGGAAAAGGAGGTTTTGGTAATGTTTACAAAGGAATTCTATCAGATGGTACACTTGTTGCTGTAAAGAGGCTTAAAGATGGCAATGCTAAGGGAGGAGAGATACAATTTCAGACTGAAGTTGAAATGATCAGTTTGGCAGTGCACAGAAACCTTCTCAAATTGTATGGATTTTGTATGACAACATCAGAAAGGCTTTTAGTTTATCCCTACATGTCCAATGGCAGCGTCGCTTCGCGTCTCAAGGCTAAGCCAGTGTTGGATTGGGGAACAAGGAAGCAAATAGCATTAGGAGCAGCAAGAGGGCTATTATACCTTCATGAGCAATGTGATCCAAAGATAATCCATAGAGATGTAAAAGCTGCAAATATATTACTTGATGATTATTGTGAAGCAGTAGTTGGTGATTTTGGTTTGGCAAAGCTTTTAGACCACAAAGATTCACATGTAACAACTGCAGTGAGGGGGACAGTAGGACATATAGCACCTGAGTATCTTTCCACAGGACAATCTTCTGAAAAGACTGATGTCTTTGGTTTTGGCATTTTGCTTCTTGAATTGATCACAGGTTTGAGGGCCCTTGAATTTGGAAAGGCTGCTAACCAAAAAGGAGTCATGCTTGATTGGGTAAAGAAAATTCATCAAGAGAAGAAGCTAGATTTGCTTGTAGACAAAGATCTCAAGAACAACTATGACAAGATTGAGCTTGAAGAAATTGTTCAAGTTGCACTCTTGTGTACACAATATCTTCCAGCCCACAGACCGAAAATGTCCGAAGTCGTACGCATGCTTGAAGGCGACGGTCTAGCCGAAAAATGGGAAGCTTCTCAAAGAGCTGAGAATAACACTACCAAGTGCAAACCATATGAATTATCTTCGTCGGATCGATATTCTGATCTTACTGATGATTCTTCTTTGTTAAACCAAGCCATGGAGCTTTCAGGTCCAAGGTGA 1881 0.3876 MKMLRREVLLCFVTLFLFWSCTNALLSPKGINFEVQALVSIKASLMDPHGIFEDWDGDAVDPCSWNMVTCSPETLVVGLGIPSQNLSGTLSPSIGNLTNLKTVVLQNNNITGPIPSELGKLSMLQTLDLSDNIFNGKIPPSLGHLRNLQYLRLNNNSFSGECPESLANMAQLAFLDLSFNNLTGNVPRILAKSFSIVGNPLVCATEKETNCHGMKLMPMSMNLNNTNYVLPSRRTKAHKMAIIFGLSLGCLCLLVLGFGFILWRRHKHNQQAFFDVKDRNHEEVYLGNLKRFPLRELQIATHNFSNKNILGKGGFGNVYKGILSDGTLVAVKRLKDGNAKGGEIQFQTEVEMISLAVHRNLLKLYGFCMTTSERLLVYPYMSNGSVASRLKAKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHKDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGLRALEFGKAANQKGVMLDWVKKIHQEKKLDLLVDKDLKNNYDKIELEEIVQVALLCTQYLPAHRPKMSEVVRMLEGDGLAEKWEASQRAENNTTKCKPYELSSSDRYSDLTDDSSLLNQAMELSGPR* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4424 626 SUPERFAMILY L domain-like 34 204 - -
Mal6g4424 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Mal6g4424 626 SMART serkin_6 304 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g4424 626 ProSiteProfiles Protein kinase domain profile. 304 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g4424 626 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Mal6g4424 626 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Mal6g4424 626 SUPERFAMILY Protein kinase-like (PK-like) 281 574 IPR011009 -
Mal6g4424 626 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Mal6g4424 626 MobiDBLite consensus disorder prediction 585 620 - -
Mal6g4424 626 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
Mal6g4424 626 Pfam Protein kinase domain 305 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g4424 626 Pfam Leucine Rich Repeat 124 145 IPR001611 GO:0005515
Mal6g4424 626 Gene3D Transferase(Phosphotransferase) domain 1 381 593 - -
Mal6g4424 626 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 3 626 - -
Mal6g4424 626 MobiDBLite consensus disorder prediction 584 626 - -
Mal6g4424 626 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 3 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4424 Mal-Chr6 126487415 126492482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4424 1 626 Receptor kinase-like Gene Family AT5G16000 74.882 0.0 960
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mal6g4424 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4424 - - gmx:100806650 1066.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4424 6 126487415 126492482 Mal3g0495 3 18894980 18899350 PCT