Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4374 ATGACAGTTCCATGTCCAATTACTTTAAAATTTTCAATACTCCTAATCATACTACTTGCATATGAAGCTAGAGAGACTATAGCTTTTGATAGTGTAAGAGTTACAATTACCAATAAGGTACAGGCTCCAACTCCAACATCCTTGACCCTTCATTGCAAATCCAAAAATAATGATCTTGGATTTCACACACTCACATTTGGAGGAGTTTACATGTTTTCATTCAAACCAGAAGTAAGCCCAATTCAAACAACTACATTATTTTTCTGCAGTTTTACATGGCCTCAAGACTCTCGTCTTCATTATCTTGACATTTACAATCAAAATCGTGACAATTGCAAAGATTGCACATGGCAAATAAATGTAAATGGAGGCTGCTTGAATGGAAAGTGTGGTCGTTGGATAAGTGACCAATTAATGGATGCGTACAACACTTCAAAGTGGTCGCAAAGGAAGGGGTTGGATGAATTGGGACATGCCCACCCTCCAACTTTTTAA 495 0.3737 MTVPCPITLKFSILLIILLAYEARETIAFDSVRVTITNKVQAPTPTSLTLHCKSKNNDLGFHTLTFGGVYMFSFKPEVSPIQTTTLFFCSFTWPQDSRLHYLDIYNQNRDNCKDCTWQINVNGGCLNGKCGRWISDQLMDAYNTSKWSQRKGLDELGHAHPPTF* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4374 164 PANTHER S-PROTEIN HOMOLOG 18-RELATED 7 133 - -
Mal6g4374 164 Pfam Plant self-incompatibility protein S1 34 127 IPR010264 -
Mal6g4374 164 PANTHER - 7 133 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4374 Mal-Chr6 125439424 125439918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4374 26 125 Carbohydrate Esterase AT3G16970 39.623 9.79e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4374 - - mtr:MTR_6g016935 210.305