Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4363 ATGCTGGCCAAGGGTTGTCATCTTGGTGGTAATACTTGGAGAGAAATACCAAAAAAATCTTCATCAGTTATCTCAAACGTTCCGCGAAAGAGATGTTTTGATGAATTAAGCTATCAAGTAGGATTCTCCACGGACTGGCGGTTTCATCCTGAAATGGTATACAACCGGAATTGCATAAGAAGAAAAATTTTTGAGATCATTCAGAATGAGAAATTCGCACCTATGCTGGAAATATTGCTACTTACAGATGCTGCTTCAAAGGAGGAATATATGAACCTGGAGACGTTGAATCAGCGTGTGCAAACTCTACTGGGTGTTAAGTCTTATAATACTGGTTACTATGGCGTGCCAGAAGTGGGACTATCTGAGCCTTCTGGTGCTCATGGCCTGCCTTGTTTGCCTGACCATGGTTCACCTATCCCCCGACTTACTGATATGGATGTGCTTCATAACTTGCCTGCTTCTTATGGTGGAAGCAATCTGGATGCTAACACCAGATCAATTAGCAACTATTTTCCTCTGCAAAACTTAAATAATTTGGAGATGGACCTGACAAAATACAGTGATTGTGTTTCCACTACAATGGGAAAACCCCTCCATTCTGAAGATTCAACTTTTATGTTCTCTCAATCTGCCTCGGTGAATACTTCAGAATTTTCCAATAATTTTCCTGACTTGTGGTCTTGCATAGATTTCAGTGAATATCAACCAGAGAAGTTAGATTTTCAGAATAATTTCACTCATGATGTCAATACTGAAGCCATGCTACTACATTCCAAAAGACGGAAAATGATGGAGTCTGGTTGTGATGTCTCTTTAGTTAACAATGCAAGTTACGATCAACCGATTCACGAGATGATTCCCTTGAAAGGCTATGGTGTAACTTCGGCTAACTATCCAAGTTTTGATGAAAGGAATTACGGGATGGTTCAACCATATTCTTTTCAAACACTTCCGGAAGTGCAGCAACAGCCAGAATTTCCCCTCTCTTCTATCTATTATGGGAACAATGTGGAGCAATTTCCTCCATCAGTGGAAGTCAACAGTCTGGCAGAACTTGTTAATACTGATGATGGGAACAATGTGCAGCAATTTCCCCTTACAGTGAAAGTTAACAGTGTGGCAGAACTTGTTAGTATTGATGAAGAGGACACACAAAAGAAAATTGGATTCAACCACGAGGGGACAGATGCTAAAGAGAAAGTCAGTGAACCAAAAGCTGATCAAGAGATGCAAACAAAACCCACAAATACAATAGTTGATGCTGTTTCCTTGATTGATTTGTTCACACGTGACCAAATAACAGAACATATTAGTAGTCTGAGAAAGGAATCTGTTCAGATGACTTCTGAGGATGAAGCAGGAATTGATGCAAACACGTGCGAATTATGTGAAAGGAAAAAGCTTTACTTTGCACCAGTACCAATTTATTGTTTATGTTGTGGCATACGCATCAAGAGAACATATTTCTGTAGAAGAGAAGAAATTGAAGCACAGTGTTGCATTTGCTCAGTGTGTTATAATACTTCTAAAGGTGGGAAAATCACATTCAATGGAACATCTATTTCTAAGACAAATCTCGAAAAAAGGAATAACAATGAAGTACTTGAAGAACCCTGGGTTGAATGCAATAAATGCAAAAGATGGCAGCATCAAATATGTGCACTCTACAACAACAAAAGAGATTACGATTGCAGTGCTGAGTATATATGTCCTGTATGCCACTTAAAAGAAATGGAAAATGGAATGCATGTTCCCTTACCAAAGGCTGCTAATTTTGGTGCTAAAGACTTGCCAAGAACCATGCTTAGTGACCACTTAGAGAAAAGGCTTTTTGAGAGTCTCTTGCAAGAGAGAGAAAACTGGGAAAAAGTTGATAAGGTTTTAGCAGCAGAAAGTCTTTCTATTAGAGAAGTGTTATCTGCCGACAAACAATTGAAAGTGAATAAGCAGTTTCTGGACATCATTCCAGAGGAGAATTACCCTGCTGAATTCTCTTATAGATCAAGAGTTATTCTTCTGTTTCAGCAAATTGAAGGAGTAGATGTATGCCTTTTTGGAATGTATGTCCAGGAATTTGGCTCCGAGTGCGGCAATCCCAATCAGCGTTGTGTATACATTTCATATCTCGATTCTGTCAAGTATTTTAGGCCTGAAAGAAGGACAAAGAGTGGAGAAGCCCTTCGTACCTTTGTTTACCATGAGATATTGATTGGATACCTTGATTTTGTTAAGAAAAGGGGTTTCTCAACTTGCTACATATGGGCCTGTGCTCCTTCAAAAAAAGGGGATGATTATATACTATATTGTCATCCCAAAGAGCAAAAGACTCCGAAGAATGATAAGCTACGCAGCTGGTATCTTTCAATGATAAAAAAGGCTACCGAAGAAAATATTGTCGTTGGTTTAACCAACGTATATGATCATTTCTTTGCTGCTTCTGAAAAAGGGAACTCCAAAGTGACAGCTTCTCGTTTGCCATACTTTGATGGAGACTGTTGGTGCGGTAATGCTATGCAAGTAGCCAAGAACTTTGAAAAAGAGAGTCCAGGAGACTTTGAAAAGTTGTTGAAACAAGTGTCAAATAGAACTTTAAAGACCATGGGACATGCCAATCCTTCCAAAGACATTCTGGTGATGCAAAAAGTTGGCCAAAATATATTGCCTACCAAGGAAAACTTCCTCATAGCTCACTTGCAATATTCTTGCATGCACTGCCGTGAAGTGATAGTGTCTGGGAAGCGATGGTTTTGCACTAAATGCAAGAAATTTCAGGAGTGTGAAAGATGTCATAGTATTGATGAACACACTTCAAAGAATGGCGAGGTGCATACACTCTGTCAGGCCGTTGTTGATGATATCCCCTCCAACACTAAACATAATGATATCGTCCTTGAGAGTGGATTATTTGAAAATAGGGACAGCTTTTTGATCTTCTGCCAGAAGTCTCAGTTTCAGTTTGACACACTCCGTCGTGCCAAGTATTCCTCCATGATGATCCTCTACCATCTACACAATCCTACTGCGATGACTGTTGGAAAATGTTGTAGCATCTGTAGTGCACCCAATGTATTCCAAAAGTGCTGGAAATGCGAGATTTGTCCAGATTATACCATTTGCTCTGCTTGCTATAAGGATAGAGGTGCTGACTGCCATGAACACAAGTTGACTCAACATGAACTCATGTCGACTCAAAATGAACACCAGGTGACTCAAAATGAACACCAGTTGACTCAAAATGAACACCAGTTGACTGAAAATGAACACCAGGTGACTCAAAATGAACACCAGTTGACTGAAAATGAACACCAGTTGACTGAAAATGAACACCAGTTAACTCAAAATTGTTCAACACCAGTATGTCAATCTGGGAATCAGGAGTCAAATGAGGAAATGATGGAGAAACTGCTGAAAGTTTTGAAGCACGCATCTCAATGCCGCGCAACTAATGCTGAACCATGCTCTCAGCCAAACTGCTCTCAAATCAAGAAGCTGTTCTTTCATGCCAGTAAGTGCAAAATTCGAGTGAAGCAGGGCTGCCAGCATTGTAAAAAAATATGGTTTATATTAACTGCTCACTCCAGGAATTGCAAAGACTCGGAATGTAGAATACCACGCTGCAGTGATCTGAAGAAGCTTATAGAACAGAGATCAATGCATTCCGAGTTTTGCCGTAGAGCTGAAGTTTCGGAAAGCGATGGAGTAGTCGTTGGCCAATGA 3720 0.3997 MLAKGCHLGGNTWREIPKKSSSVISNVPRKRCFDELSYQVGFSTDWRFHPEMVYNRNCIRRKIFEIIQNEKFAPMLEILLLTDAASKEEYMNLETLNQRVQTLLGVKSYNTGYYGVPEVGLSEPSGAHGLPCLPDHGSPIPRLTDMDVLHNLPASYGGSNLDANTRSISNYFPLQNLNNLEMDLTKYSDCVSTTMGKPLHSEDSTFMFSQSASVNTSEFSNNFPDLWSCIDFSEYQPEKLDFQNNFTHDVNTEAMLLHSKRRKMMESGCDVSLVNNASYDQPIHEMIPLKGYGVTSANYPSFDERNYGMVQPYSFQTLPEVQQQPEFPLSSIYYGNNVEQFPPSVEVNSLAELVNTDDGNNVQQFPLTVKVNSVAELVSIDEEDTQKKIGFNHEGTDAKEKVSEPKADQEMQTKPTNTIVDAVSLIDLFTRDQITEHISSLRKESVQMTSEDEAGIDANTCELCERKKLYFAPVPIYCLCCGIRIKRTYFCRREEIEAQCCICSVCYNTSKGGKITFNGTSISKTNLEKRNNNEVLEEPWVECNKCKRWQHQICALYNNKRDYDCSAEYICPVCHLKEMENGMHVPLPKAANFGAKDLPRTMLSDHLEKRLFESLLQERENWEKVDKVLAAESLSIREVLSADKQLKVNKQFLDIIPEENYPAEFSYRSRVILLFQQIEGVDVCLFGMYVQEFGSECGNPNQRCVYISYLDSVKYFRPERRTKSGEALRTFVYHEILIGYLDFVKKRGFSTCYIWACAPSKKGDDYILYCHPKEQKTPKNDKLRSWYLSMIKKATEENIVVGLTNVYDHFFAASEKGNSKVTASRLPYFDGDCWCGNAMQVAKNFEKESPGDFEKLLKQVSNRTLKTMGHANPSKDILVMQKVGQNILPTKENFLIAHLQYSCMHCREVIVSGKRWFCTKCKKFQECERCHSIDEHTSKNGEVHTLCQAVVDDIPSNTKHNDIVLESGLFENRDSFLIFCQKSQFQFDTLRRAKYSSMMILYHLHNPTAMTVGKCCSICSAPNVFQKCWKCEICPDYTICSACYKDRGADCHEHKLTQHELMSTQNEHQVTQNEHQLTQNEHQLTENEHQVTQNEHQLTENEHQLTENEHQLTQNCSTPVCQSGNQESNEEMMEKLLKVLKHASQCRATNAEPCSQPNCSQIKKLFFHASKCKIRVKQGCQHCKKIWFILTAHSRNCKDSECRIPRCSDLKKLIEQRSMHSEFCRRAEVSESDGVVVGQ* 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4363 1239 ProSitePatterns Zinc finger ZZ-type signature. 1016 1043 IPR000433 GO:0008270
Mal6g4363 1239 Gene3D - 1012 1063 IPR043145 -
Mal6g4363 1239 Gene3D - 896 945 IPR043145 -
Mal6g4363 1239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 533 578 IPR013083 -
Mal6g4363 1239 PANTHER HISTONE ACETYLTRANSFERASE HAC2 376 1212 - -
Mal6g4363 1239 Gene3D TAZ domain 1121 1237 IPR035898 -
Mal6g4363 1239 ProSiteProfiles Zinc finger ZZ-type profile. 898 959 IPR000433 GO:0008270
Mal6g4363 1239 Pfam TAZ zinc finger 1134 1207 IPR000197 -
Mal6g4363 1239 SUPERFAMILY TAZ domain 1131 1216 IPR035898 -
Mal6g4363 1239 PANTHER CBP/P300-RELATED 376 1212 IPR013178 GO:0004402|GO:0006355|GO:0016573
Mal6g4363 1239 ProSiteProfiles Zinc finger TAZ-type profile. 1126 1210 IPR000197 -
Mal6g4363 1239 ProSiteProfiles Zinc finger PHD-type profile. 500 577 IPR019787 -
Mal6g4363 1239 CDD PHD_HAC_like 502 574 - -
Mal6g4363 1239 Pfam Histone acetylation protein 629 837 IPR013178 GO:0004402|GO:0006355|GO:0016573
Mal6g4363 1239 SUPERFAMILY RING/U-box 992 1057 - -
Mal6g4363 1239 SUPERFAMILY RING/U-box 878 938 - -
Mal6g4363 1239 SMART KAT11_2 617 910 IPR013178 GO:0004402|GO:0006355|GO:0016573
Mal6g4363 1239 ProSiteProfiles Zinc finger ZZ-type profile. 1011 1064 IPR000433 GO:0008270
Mal6g4363 1239 SUPERFAMILY FYVE/PHD zinc finger 537 577 IPR011011 -
Mal6g4363 1239 SMART TAZ_2 1127 1208 IPR000197 -
Mal6g4363 1239 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 592 1009 IPR031162 GO:0004402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4363 Mal-Chr6 125168825 125174652 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Mal6g4363 HAT_KAT11 1.3e-27 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4363 K04498 - aprc:113866525 1015.76