Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4361 ATGTTCCCTTACAGTTCAAACCCTTACCCTTCATTTCTTACTTCATCTTCTTCTTCACTCTTTCCTTTTCCTTTTCTTAATCCTGAAAATGCTTCTTTAAACAACAATAACAACAACAATACCCTTTTTCATGATCCATTTTCTATTCCCTACATACCAACCCATCATCATCCTCAACCTCATCATCATAACATTACAAATATTCCAGAAACCCTAACCAATTTGGTTGTTTCACAAGAAAATAATAATAGTAATAACAATAATAACATTGCTATTCCAATGACTAAACAAGATCCTTCAACTATTGATGGTTCTTCTCAATATGGTATTTCTTGTTTCCTTACAAAGAAACCGGTGAAGAAAGACCGACATAGCAAGATTTACACTTCTCAAGGTTTGAGAGATCGAAGGGTTAGGCTTTCGATCGATATTGCTCGAAAGTTCTTTGATCTTCAAGACATGTTAGGGTTTGACAAAGCTAGCAACACACTTGATTGGCTTTTCACAAAATCTAAGAAAGCAATCAAGGATCTAACTAAGAGTAAGCAAAGAAACAATAATAGTGATGAAGTTGGTGATGGTTATGGTGCTAATGCTAAAAGCTTCTCATCTTCTTCGGATTGCGAAGATTCCGAAGATGCTATTGTTGATTCTTCAAACCTAAAGCAACATAGAGAGGGTGTAGGAAGTAAAATTGAAGAGAAGAAGTTGAAAAGGGCACAGATCAAAGAACCTGCTTGTGTTAAAGCAAGTAAGATGAAGGAGTCAAGGGAAAAAGCAAGAGCAAGAGCAAGGGAAAGAACTAGTAACAAGATCTCCAACAACAATATAAGGGGGGTGCAGGAAGTAGAATTGAAGAAAAAGTATGAAAATAATAATCATCAAGCTTTTCAACAAGATCATCAAGTTGTGAGTAGTAGTGAAGGACAACGAAATGATTTTAATGTTATTGAGGAATCAATTGTGATTAAGAGGAAGTTGAAGCCTTCTTTGATGCTTTCTCATCATCATAATCATCATCACCAAAATCATGTGATCCCTAAGGAAGCAACAAGTTTCAACAACAATGGTGAATATAATCACTCTTACCCTAATTCATCTCCAAATTGGGATGCTAATAATGGTACTTCCTCCACTAATCGCTCCACCTTTTGTGCTATAGCCAGCATGAATCTTTCTACAGGGCTTCAAATCTTTGGAAAATCATGGGAGGAATGCACCAATCCACGTCTACATTAG 1239 0.3608 MFPYSSNPYPSFLTSSSSSLFPFPFLNPENASLNNNNNNNTLFHDPFSIPYIPTHHHPQPHHHNITNIPETLTNLVVSQENNNSNNNNNIAIPMTKQDPSTIDGSSQYGISCFLTKKPVKKDRHSKIYTSQGLRDRRVRLSIDIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKDLTKSKQRNNNSDEVGDGYGANAKSFSSSSDCEDSEDAIVDSSNLKQHREGVGSKIEEKKLKRAQIKEPACVKASKMKESREKARARARERTSNKISNNNIRGVQEVELKKKYENNNHQAFQQDHQVVSSSEGQRNDFNVIEESIVIKRKLKPSLMLSHHHNHHHQNHVIPKEATSFNNNGEYNHSYPNSSPNWDANNGTSSTNRSTFCAIASMNLSTGLQIFGKSWEECTNPRLH* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4361 412 ProSiteProfiles TCP domain profile. 120 178 IPR017887 -
Mal6g4361 412 MobiDBLite consensus disorder prediction 355 377 - -
Mal6g4361 412 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 411 IPR005333 GO:0003700
Mal6g4361 412 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 4 411 - -
Mal6g4361 412 MobiDBLite consensus disorder prediction 215 233 - -
Mal6g4361 412 MobiDBLite consensus disorder prediction 202 233 - -
Mal6g4361 412 Pfam TCP family transcription factor 119 273 IPR017887 -
Mal6g4361 412 ProSiteProfiles R domain profile. 254 271 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4361 Mal-Chr6 125110405 125112204 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4361 42 276 TCP Transcription Factor Family AT1G67260 35.833 1.39e-33 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal6g4361 TCP 1.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4361 - - cam:101499957 515.768