Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4280 ATGAACAATTCTCCAAAAGAGATTGCATCACCATTGAATCTCAACATTAAGAACAAGATTTCTCTCCTATCTAATGCCTCCAAAGCTCCACCATCCCCCAAGCAACCTTTCTTCATTGGTGTTGCTGGTGGAACTGCATCTGGGAAAACAACTGTGTGCAACTTGATAAATAGCCAGCTTCATGATCAACGTATTGTCCTCATTAATCAAGACTCATTTTACCACTCATTGAGTGATGAGACATTACAAAAAGTTAATGACTACAACTTTGATCATCCTGATGCATTTGATATAGAGCTTATGCTTTCTTGTATGGATAAATTAAAACATGGACAAGCTGTTACCATACCAAATTATGATATCAATAGCCGTAAGAGAACTGAACCTCCACGTCAGGTTCACCCTGCAGATATCATAGTTTTAGAAGGGATACTTGTTCTTCATGATTCTCGTGTCCGTGATCTTTTGAACATGAAGATCTTTGTTGATGAAGATTCTGATGTGCGTCTTGCACGAAGGATTCAACGTCTTGCCATTGAACGTGGGAGGAACATTCAAAATGTTCTAGACCAATATTGCAGATTTGTGAAACCCAGTTTTGAAGATTTTGTACTTCCAACAAAAAAATATGCTGATATAATCATCCCTGGTGGAGGAGATAATGAAGTTGCTATTGACTTGATAATACAAAATATACGTACAAAGCTTGGTCAACATGATATGTGTAAAATATATCCAAATATTTTTGTCATTTTTCCTACATTTCAGATAAAGGGAATGCATACTTTAATTCGTGATGTTGGAACTACAAAGCATGATTTTGTTTTTTATTCAGATCGTCTTATTAGGCTGGTTGTTGAGCATGGACTTGGTCACCTTCCTTTTACAGAAAAGCAAGTCACAACACCAACAGGATCTGTATACTCTGGTGTTGTTTTCTGTAGCAGGCTATGTGGAGTATCAATTATTAGAAGTGGAGAAAGCATGGAAAATGCATTGAGAGCATGTTGCAAAGGAATCAAAATTGGTAAAATCCTTATTCATGGACATGGCTCAAATGGAAGGCAGTTAATCTATGAGAAGTTACCATCAGATATTGCAAGTCGTCATGTGTTGCTACTTGATCCAGTTCTGGCTACAGGAAATTCTGCAGTGAAAGCTATCTCTCTTCTTCTAAACAAAGGTGTACAAGAATCCAACATCATCTTTCTAAATTTAATAGCAGCACCACAAGGAATAAATGTCATTTGTGAGAAATTTCCAATGTTAAAACTTGTGACATCAGAGATTGATGCAACACTAAATGAGAATTCTCGTGTGATCCCAGGCATGGGGGAATTTAGTGATCGTTACTTTGCCAGTGATGAATAA 1371 0.3698 MNNSPKEIASPLNLNIKNKISLLSNASKAPPSPKQPFFIGVAGGTASGKTTVCNLINSQLHDQRIVLINQDSFYHSLSDETLQKVNDYNFDHPDAFDIELMLSCMDKLKHGQAVTIPNYDINSRKRTEPPRQVHPADIIVLEGILVLHDSRVRDLLNMKIFVDEDSDVRLARRIQRLAIERGRNIQNVLDQYCRFVKPSFEDFVLPTKKYADIIIPGGGDNEVAIDLIIQNIRTKLGQHDMCKIYPNIFVIFPTFQIKGMHTLIRDVGTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVTTPTGSVYSGVVFCSRLCGVSIIRSGESMENALRACCKGIKIGKILIHGHGSNGRQLIYEKLPSDIASRHVLLLDPVLATGNSAVKAISLLLNKGVQESNIIFLNLIAAPQGINVICEKFPMLKLVTSEIDATLNENSRVIPGMGEFSDRYFASDE* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4280 456 Gene3D - 32 238 IPR027417 -
Mal6g4280 456 PANTHER URIDINE KINASE-LIKE PROTEIN 5 20 452 - -
Mal6g4280 456 CDD UMPK 38 235 IPR000764 -
Mal6g4280 456 PANTHER URIDINE KINASE 20 452 - -
Mal6g4280 456 Gene3D - 239 454 IPR029057 -
Mal6g4280 456 Pfam Phosphoribulokinase / Uridine kinase family 38 223 IPR006083 GO:0005524|GO:0016301
Mal6g4280 456 PRINTS Uridine kinase signature 167 177 - -
Mal6g4280 456 PRINTS Uridine kinase signature 66 77 - -
Mal6g4280 456 PRINTS Uridine kinase signature 111 126 - -
Mal6g4280 456 PRINTS Uridine kinase signature 181 192 - -
Mal6g4280 456 PRINTS Uridine kinase signature 36 53 - -
Mal6g4280 456 PRINTS Uridine kinase signature 203 216 - -
Mal6g4280 456 SUPERFAMILY PRTase-like 238 453 IPR029057 -
Mal6g4280 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 228 IPR027417 -
Mal6g4280 456 Pfam Uracil phosphoribosyltransferase 253 453 - -
Mal6g4280 456 TIGRFAM udk: uridine kinase 37 235 IPR000764 -
Mal6g4280 456 CDD PRTases_typeI 317 427 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4280 Mal-Chr6 122938587 122946295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4280 21 456 PRT Gene Family AT4G26510 72.248 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4280 K00876 - pop:7461316 694.501