Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4279 ATGTTCACATCAAGGAAGAAAATCAGCAAGGATAAAGGTGCTGAGCCAACTGAATTCGAGGAAACTGTTGGACAGGCTTTGTTTGATCTCGAAAACACCAACCATGAGTTGAAAAGTGAGCTCAAAGATTTATACATTAATTCAGCAGTCCAAGTTGATGTTTCTGGCAACCGCAAGGCTGTGGTTATCCATGTCCCGTACAGATTGAGGAAGGGATTCCGCAAAATTCATGTCAGGCTTGTTAGGGAGCTCGAGAAGAAGTTTAGCGGCAAGGATGTTATCCTGATCGCCACCAGGAGGATCGTTCGGCCACCAAAGAAAGGTTCCGCTGCTCAGCGCCCCCGAAGCCGTACACTTACTGCTGTGCACGAGGCAATGCTTGAGGATGTTGTATTACCTGCTGAGATTGTTGGGAAGCGCATTAGGCACCGAATTGATGGATCAAAGATCATGAAGGTGTTTTTGGACCCAAAGGAACGGAATAACACCGAATACAAGCTGGAGACATTTTCTGCAGTTTACAGGAAACTATCTGGCAAAGATATTGTCTTTGAGTATCCAGTTACCGAGGCTTAG 576 0.4583 MFTSRKKISKDKGAEPTEFEETVGQALFDLENTNHELKSELKDLYINSAVQVDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAQRPRSRTLTAVHEAMLEDVVLPAEIVGKRIRHRIDGSKIMKVFLDPKERNNTEYKLETFSAVYRKLSGKDIVFEYPVTEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4279 191 Coils Coil 27 47 - -
Mal6g4279 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Mal6g4279 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Mal6g4279 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
Mal6g4279 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4279 Mal-Chr6 122930020 122931607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4279 1 191 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 79.581 4.12e-115 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4279 K02993 - gmx:100527680 352.829