Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4242 ATGGGGCAGGAGAGTCAGAGCCCCAAGGATTCCTGTGCTGCAGACATTAAAATGATCGCTGGCAAAGAGACTGATTGTACAAGTGCAAATGCTCATCCTGTTAGCCTTACTCAGATGGAAATCAATGATGAATGTCAGACCTCAAATACTTCCAATGAAAGCCAATTTCGTATTGACGTTGCTAGAGGACAGCTGTGTCAGAACCCCGATGCTACCTCTATATCAGTGACCAATACTGATGTAATAAATGAGGAGGAAATATATGTGGCACCAAATATTGGCATGGAGTTTGAATCAGAAGACCATGCTTATAAGTGTTATAACAAGTATGCTATTCTGAAAGGTTTCAGCATAAGAAAGGATTTCATCAATAAAAGTAGGATAGATGGTGCAGTGATGTCCAGAAGATTCACCTGCCATAGACAGGGTTTTCGTCCTAACAAAGGTTATACAAATCAGAAGAAATTCCAGCAGGAAACAAGGACCGGTTGCTTGGCACATATGACTATTTCTCGTCAGCCAAATGGCAAGTTACGTGTCACTAGTTTCGAAACAGAACACAATCACGAGTTTGTAACATCGTGTAATGCTCATATGCTGCCATCACAGAAAAAATTGAGTTTCGCTCAAGCTGTTGAAGTGAACGTAACCGAGTCTAGGTTGGATGGGGTACCAAAACTGGGAATGGGATTTGATTCGGAGGAGCATGCATATGAATTTTATAATGCATATGCTGCACAAGTAGGTTTCAGTGTGAGAAAAGATTATGTAAATAGGAGTAAAGTTGATGGTGCTGTAGCATCAAGAAGATTTACTTGCTTCAGGGAAGGTTTTCGGCAGAAAGAGAAACGAGATACGGATGTAAAGAGACCTCGGAAGGATACTAGAATTGGATGTTTAGCACAACTGATTATTTCTCGTCAGCCTGATGGCAGGTATCATGTAACTAGTTTTGAAGAAAAACACAATCATGAGCTTGTTGCTGCGTGTAGAGTTCATATGTTACGATCGCAGAAGAGATCAGCTGCAACTCGAGCTGAAGACAACATTGTCGATGAAGGTTTTCATGATCTGGATTATGACCCTGTGAATTGTGAATATCAACTACCTTTCAAACGCACAAGAGAAATACAAGAGGAAGAAGTCGAAAAGATTAGGCACTACTTTCAAAGCAAGAAATCAAAGGATCCTTCTTTCTTTTATGCTTTTCAGCTTGATGCCGAGAAGCAAATAACTAACATATTTTGGGCTGATGCAAAGATGATAGTTGACTACAGTGATTTTGGCGATGTTGTTTGTTTTGATACCAGTTATAAATTTTACAAAGACTGCCGACCGTTCGCTCCATTTCTTGGTATAAATAATCACAGGCAAATGATTATATTTGGAGCTGCACTTCTATACGATGAATCTGTGGAATCTGTTAAGTGGCTGTTTCATGTTTTCATTGAGGCTATGTCTGGAACCAAGCCAAAGACAATCCTAAGAGATCAAGATGCAACAGTAGCTGAAGCTGTTAACTCCGTATTACCTCAAACAAATCAACGAGTTTGTGTATGGCATGTCTACCAAGATGCCCTCAAGCAACTGAGTCATATGTACGTTGAATCCAATTCCTTTGTAAATGATTTGAGCAGCTGCTTTTTTAATCATGAGGAAGAAGAGGATTTTGTTAATGCATGGAATACTCTCATGGACATGCATAATCTGTGGGAAAATGAATGGTTGCGTCAAATATATGAAAGCAGAGACCAATGGGCCATAGCATATGGAAGACATATTTTTTGTGCCGACATGGCAAGCTTGCTTGTGCGAGAAAATCTTACCGGCAACTTGAAAAAGCACCTAAAGAATGACTCAGGCGTTCTTCCATTTCTCAAGCATCTTGGGAAGATGGTGACTGATTGGCACTACAAGGAATTAGAAGCTAATTATGACACAAGCCGGCATATGCCAGCCCTAATTGGCGATATCATTACATTAAAGCATGCAAGAGATCCATACACACCAAAGATATTCGAGCTATTCCAGAAAGAATATGAAGCATGTTTAAATCTAGTGCTGAAGCATTCCGGTGAGAGTGGACCACTGTATAACTATAAAGTCAGCGTCTATGAACAAGTCCGAGAGTATACAATTACTTTCGATTCGTCTAATGAGACAATCAGTTGCAGCTGTATGAAGTTTGAGTGTGTGGGAGTCTTGTGCTGCCATGCATTAAAAGTTCTTGATTATAGGAACATAAGGGTAGTTCCGTCCAAGTACATCCTAAAGAGATGGACCAAAAATGCTAGAGTTTGA 2301 0.4003 MGQESQSPKDSCAADIKMIAGKETDCTSANAHPVSLTQMEINDECQTSNTSNESQFRIDVARGQLCQNPDATSISVTNTDVINEEEIYVAPNIGMEFESEDHAYKCYNKYAILKGFSIRKDFINKSRIDGAVMSRRFTCHRQGFRPNKGYTNQKKFQQETRTGCLAHMTISRQPNGKLRVTSFETEHNHEFVTSCNAHMLPSQKKLSFAQAVEVNVTESRLDGVPKLGMGFDSEEHAYEFYNAYAAQVGFSVRKDYVNRSKVDGAVASRRFTCFREGFRQKEKRDTDVKRPRKDTRIGCLAQLIISRQPDGRYHVTSFEEKHNHELVAACRVHMLRSQKRSAATRAEDNIVDEGFHDLDYDPVNCEYQLPFKRTREIQEEEVEKIRHYFQSKKSKDPSFFYAFQLDAEKQITNIFWADAKMIVDYSDFGDVVCFDTSYKFYKDCRPFAPFLGINNHRQMIIFGAALLYDESVESVKWLFHVFIEAMSGTKPKTILRDQDATVAEAVNSVLPQTNQRVCVWHVYQDALKQLSHMYVESNSFVNDLSSCFFNHEEEEDFVNAWNTLMDMHNLWENEWLRQIYESRDQWAIAYGRHIFCADMASLLVRENLTGNLKKHLKNDSGVLPFLKHLGKMVTDWHYKELEANYDTSRHMPALIGDIITLKHARDPYTPKIFELFQKEYEACLNLVLKHSGESGPLYNYKVSVYEQVREYTITFDSSNETISCSCMKFECVGVLCCHALKVLDYRNIRVVPSKYILKRWTKNARV* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4242 766 Pfam SWIM zinc finger 700 746 IPR007527 GO:0008270
Mal6g4242 766 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 217 766 - -
Mal6g4242 766 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 46 207 - -
Mal6g4242 766 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 217 766 IPR031052 GO:0006355
Mal6g4242 766 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 207 IPR031052 GO:0006355
Mal6g4242 766 SMART 26again6 722 749 IPR006564 GO:0008270
Mal6g4242 766 Pfam FAR1 DNA-binding domain 239 327 IPR004330 -
Mal6g4242 766 Pfam FAR1 DNA-binding domain 107 192 IPR004330 -
Mal6g4242 766 Pfam MULE transposase domain 431 524 IPR018289 -
Mal6g4242 766 ProSiteProfiles Zinc finger SWIM-type profile. 711 747 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4242 Mal-Chr6 121828339 121830639 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal6g4242 MULE 6.1e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4242 K17604 - gmx:102659753 1194.87