Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4234 ATGAGTTATGCTCGATCTATTGGTTTTGGGGTTACTAAACTTAGTAGCAAAAATGCAGATGATGGAAAAAAATATTTTACTCTAGCATGCGGTCGTGGAACAAAGTATGTAAGTAAATCAAAGAAGCTTTTGAACCCAAATCCTATAACAAAAACCCAGTGCAAGGCTAGATTGAATGCATGTATTTGTTTAGATGGAACAGTTATTATTTCAAAAATTGTTCTTGAGCATAATCATGATCTAAGCCCTAGCAAAGCGCGCTATTTTAGAAGTAATAAGAATATGGACCCTCAATTGAAAAGGAGGATAGAACTCAATGATCAAGCTGGAATAAATGTAAGCAGAAATTTCCGATCTTTGGTTGTTGAAGCGAATGGGTATGAGAATATGACATTTGGTGAAAAGGATTGTAGAAATTATATAGATAAAGTTAGGAGACTACGACTTGGAGTTGGAGATGCTGAGGCGATTCAGAATTATTTTGTTAAAATGCAAAAGCAAAATAGCCAATTCTATTATGTCACAGACATTGATGATGAAAGTCGCTTACGAAATGTATTTTGGGCAGATGCGAGATGTAGGGCTGCATATGAATATTTTGGTGAAGTCGTAACATTTGACACTACTTACTTAACAAATAAATATGACATGCCTTTTGCCCCTTTTGTTGGAGTAAACCATCATGGTCAATCTGTGTTGTTGGGTTGTGCTTTATTGTCGAATGAGGATACTAAGACCTTTACTTGGTTGTTCAACACATGGTTAGAATGCATGAATGGACGTGCTCCAATTTCCATCATTACTGATCAAGATAAAGCCATGAAAAATGCAATTGAGGTCGTTTTTCCAAAAGCTCGTCATCGATGGTGTTTGTGGCATATAATGAAAAAGGTACCAGAAAAGCTAGGTAGACATTCTGATTATGAGTCTATCAAAGCACTTCTACATGATGTTGTATATGATTCTTTGAGTAAAAGTGATTTCATGGAAAATTGGGAAAGAATGATTGAAGATTTTGAACTTCAGGATAATGAATGGTTGAAGGGGCTTTTTGATGAAAGAAATCGTTGGGTTCCTACATATGTGAGAGACACATTTTGGGCTGGAATGTCAACGACTCAAAGAAGTGAAAGTATGAACTCATTTTTTGATGGCTATGTAAATTCAAAGACAACATTGAAGCAATTTGTTGAACAATATGACAATGCATTGAGAGATAAAGTTGAAAAGGAAAACAAGGCTGATTTTGGTTCATTTAATACAATGATAGCTTGTGTAAGTCATTTTGGCTTTGAGCTCCAATTCCAGAAAGCATTCACCAATGCAAAATTCAAAGAATTTCAAGTGGAGGTTGCTTCTATGATTTATTGCCATACTTGCTTTGAGAGAGTGGAAGGATCAAATTCTATATATTCGGTTATAGAAAGCAAGAAAAAATTTGACAAAATCAAGGACATAGTGTTTGAGGTATCATTCAATGAGGAAGACTTCGAGTTACAATGTATGTGTTGTTTGTTTCAATTCAAAGGTATTTTGTGCAGGCACATCCTTTGTGTGCTTAAGCTAGCAGGCAAAACAGAGTCATTGCCGTCCTCTTATATTTTCTCACAGTGGAGGAAGGATATAAAGCGAAGACATACCCTTATTAAATGTGGTTTTGATCATTTAGTTGGAAATGTTGAATTGCAAAGAGTTGATAAAGCTTGTAGTGCCTTTTACGAAGTTGCTTCTGTGGTGATAAATACCGATAATGATTTGTCAAAAATGATGAATCGGATCAAAGAAATAAAAAATGAGTTTACCTCTAAAGAAACATCCCCTGGCATTGTAGAAGAAGATGGTTCAGTTCAAAATCAAGTGACTAAAATTCTTGACCCTGTACCGACTCGAAGTAAAGGGCGTCCTCCGTTAAAAAGGAAGTCCTCTAAAGTTGATCAAATTGTGCAGAAACTTGGAAATAGAAAGAGGACCCAAAAAAGAAGGCAAGAAAGTGGAAATCGTCAAAGTCAACAAGAGGTAGTTTTAAGAACTGTGTACATCTAA 2043 0.3554 MSYARSIGFGVTKLSSKNADDGKKYFTLACGRGTKYVSKSKKLLNPNPITKTQCKARLNACICLDGTVIISKIVLEHNHDLSPSKARYFRSNKNMDPQLKRRIELNDQAGINVSRNFRSLVVEANGYENMTFGEKDCRNYIDKVRRLRLGVGDAEAIQNYFVKMQKQNSQFYYVTDIDDESRLRNVFWADARCRAAYEYFGEVVTFDTTYLTNKYDMPFAPFVGVNHHGQSVLLGCALLSNEDTKTFTWLFNTWLECMNGRAPISIITDQDKAMKNAIEVVFPKARHRWCLWHIMKKVPEKLGRHSDYESIKALLHDVVYDSLSKSDFMENWERMIEDFELQDNEWLKGLFDERNRWVPTYVRDTFWAGMSTTQRSESMNSFFDGYVNSKTTLKQFVEQYDNALRDKVEKENKADFGSFNTMIACVSHFGFELQFQKAFTNAKFKEFQVEVASMIYCHTCFERVEGSNSIYSVIESKKKFDKIKDIVFEVSFNEEDFELQCMCCLFQFKGILCRHILCVLKLAGKTESLPSSYIFSQWRKDIKRRHTLIKCGFDHLVGNVELQRVDKACSAFYEVASVVINTDNDLSKMMNRIKEIKNEFTSKETSPGIVEEDGSVQNQVTKILDPVPTRSKGRPPLKRKSSKVDQIVQKLGNRKRTQKRRQESGNRQSQQEVVLRTVYI* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4234 680 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 605 IPR031052 GO:0006355
Mal6g4234 680 Coils Coil 393 413 - -
Mal6g4234 680 Pfam MULE transposase domain 203 297 IPR018289 -
Mal6g4234 680 SMART 26again6 499 526 IPR006564 GO:0008270
Mal6g4234 680 Pfam SWIM zinc finger 495 520 IPR007527 GO:0008270
Mal6g4234 680 ProSiteProfiles Zinc finger SWIM-type profile. 488 524 IPR007527 GO:0008270
Mal6g4234 680 PANTHER OS03G0843700 PROTEIN 2 605 - -
Mal6g4234 680 Coils Coil 579 599 - -
Mal6g4234 680 MobiDBLite consensus disorder prediction 638 666 - -
Mal6g4234 680 MobiDBLite consensus disorder prediction 626 670 - -
Mal6g4234 680 Pfam FAR1 DNA-binding domain 2 82 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4234 Mal-Chr6 121632296 121634338 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal6g4234 MULE 9.6e-37 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4234 - - cam:101506732 979.163