Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4213 ATGGTACTTGATCTCTCTCCTCAATCATCCAAAAGAAGAAGAATCACAAACGCTTACTCCATGGCGACAATTGCAGAGATGCAAGAAAAATTTGGACGAGAGATTCGTGTTTTTGAAACAATGTCTCTTTCTGCATCACCAAATCCTGCAGCAAACAAAGAAGAGGAGACCGAAGAGTTCTATGAGTTTACTGCTGAAGATTATTACAAAATCTTGGCTACTAAAAAGGAAGATAAATTCCTCAAGACTCGAAAACTTCGAGAAGCAGATGAGGCAGCTCGCAGGTCAAGAATAACAAAGGCTGTAATTAGAGTTCGCTTCCCTGATAATCACACACTGGAAGCTACCTTCCATCCATCAGAAACCATTCAGAGTTTAACTGATCTCCTCAAGAAAGTGATTGCACAACCAGAGAAACCATTTTATTTATATACTACTCCGCCCAAGAAGCTGATCAAAGACATTTCTCAGGATTTCTATGCTGCTGGATTTTGCCCTGGTGCCATTGTGTACTTTTCATATGATGTTTCAAAAGGTGATAGCAGCGACGATGGACCTTACCTTCCAGAAGAGGTCATGTCTTTGAAAGGTTTGGATTTCTCTAATGATAAAGGTCAGTCGTCAGATCCTGCACAGTCTGCGCCCGTGTCTGCTGAGCCTGTTGTGCAACCTCCTGCTGTTGAAGAGCGAAAACCGGCCGAGAAAAAGCTTGTTAAGCCAAAGTGGTTGAAAATGTGA 738 0.4214 MVLDLSPQSSKRRRITNAYSMATIAEMQEKFGREIRVFETMSLSASPNPAANKEEETEEFYEFTAEDYYKILATKKEDKFLKTRKLREADEAARRSRITKAVIRVRFPDNHTLEATFHPSETIQSLTDLLKKVIAQPEKPFYLYTTPPKKLIKDISQDFYAAGFCPGAIVYFSYDVSKGDSSDDGPYLPEEVMSLKGLDFSNDKGQSSDPAQSAPVSAEPVVQPPAVEERKPAEKKLVKPKWLKM* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4213 245 SUPERFAMILY Ubiquitin-like 76 172 IPR029071 -
Mal6g4213 245 Pfam UBX domain 99 155 IPR001012 GO:0005515
Mal6g4213 245 MobiDBLite consensus disorder prediction 200 214 - -
Mal6g4213 245 MobiDBLite consensus disorder prediction 198 245 - -
Mal6g4213 245 CDD UBX2_UBXN9 101 174 - -
Mal6g4213 245 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 11 245 IPR044232 GO:0032984|GO:0051117
Mal6g4213 245 MobiDBLite consensus disorder prediction 228 245 - -
Mal6g4213 245 ProSiteProfiles UBX domain profile. 96 172 IPR001012 GO:0005515
Mal6g4213 245 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1-RELATED 11 245 - -
Mal6g4213 245 Gene3D - 90 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4213 Mal-Chr6 121149501 121153816 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4213 11 121 C2H2 Transcription Factor Family AT2G01650 33.333 1.12e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4213 K15627 - gmx:100792947 320.087