Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4184 ATGGGGGAAAATTCAAGTTTTGTAATGGAAAACACATCAATGAATGAAAACTTGGAGGAAGAATTTGAAGAAAGGGATCCAGAAAGAAATCCAATGAATGAACCACTTCTAAAGAGGAACAGAACACTTTCTTCAAATCCACTTGCTCTTGTTGGAGCAAAAGTTTCCTATATAGAAAGCTTAGATTATGAGATCAATGAGAATGATTTGTTCAAACAAGATTGGAGAAGTAGATCAAGAGGTCAAGTGTTGCAATACATAATCTTGAAATGGTTACTTGCATTCCTTGTTGGACTTCTTACTGGTGTTATAGCTACTCTTATCAATCTTGCTGTTGAGAATATTTCAGGGTATAAACTCCTTGCTGTTGTTGAATACATTCAACAAAAAAGGTACTTGATGGGGTTTCTATATTTCTTGGGCACTAATTTCATTTTGACATTCATTGCTTCAATTCTTTGTGTTTGTTTTGCTCCCACTGCTGCTGGACCAGGAATACCTGAAATTAAAGCTTATCTTAATGGTGTTGATACTCCAAACATGTATGGTGCTACAGTTTTGTTTGTTAAGATAATTGGAAGCATTGGAGCTGTTTCAGCAGGTCTAGATTTAGGAAAAGAAGGTCCATTGGTACATATTGGAAGTTGCATTGCTTCCCTACTAGGCCAAGGAGGTTCAGACAATCATAGAATCAAATGGAAATGGGTAAGATACTTCAACAACGATCGCGACCGTCGCGATCTAATCACATGTGGAGCTTCATCGGGCGTTTGCGCCGCTTTCCGAGCTCCGGTCGGCGGCGTGCTCTTTGCTCTTGAAGAGGTTGCAAGTTGGTGGAGAAGTGCTCTTCTATGGAGAACATTTTGTAGCACAGCTGTTGTTGTGGTTGTTCTAAGGGCATTCATTGAACTTTGTCATGAAGGGAAATGTGGTCTTTTTGGTGAAGGAGGTTTGATTATGTTTGATGTTAGTAATGTCACTGTGAGTTATGATGTTATGGATATTATCCCCGTTGCTATTATTGGAATCATTGGTGGTGTTTTGGGAAGCCTTTATAACTATCTTCTTCATAAGATCCTTAGGGTCTATAATCTCATTAATCAGAAAGGAAAAATATACAAGCTTCTTCTAAGTCTCTCAGTATCAATCTTCACATCAGTATGTCAATATGGTCTTCCATTCCTAGTAAAATGCACACCATGTGATGATTTATCAATGTGTCCTACAAATGGAAAATCAGGAAACTACAAACAATTCAACTGTCCAAAAGGCCATTACAATGACCTAGCTACTCTTCTACTAACAACAAATGATGATGCAGTTAGAAACATTTTCTCAACAAACACACCTCATGAATACCAACCTTTTTCAATCCTAATATTTTTCTCACTTTATTGCATATTAGGTTTAATCACTTTTGGTATTGCTGTTCCATCAGGACTGTTTTTACCTATCATATTAATCGGTTCGGGCTATGGCCGCCTCCTCGGAATTATAATGAGACCTTACACAAACATTGATCATGGTTTGTTAGCTGTTCTTGGTGCAGCCTCATTTATGGCAGGGTCAATGAGAATGACTGTTTCACTTTGTGTTATTTTTCTTGAACTTACCAACAATCTTCTTTTGTTACCAATAACAATGATTGTTCTTCTCATAGCGAAAACCGTTGGAGATAGTTTCAATCCAAGTGTTTATGAGATGATACTTCATTTGAAAGGTTTACCTTTTATGGATGCTGATCCCGAACCGTGGATGAGAAATTTATCAGTCGGAGAACTTATCGAGGTGAAATCATCGGTCGTTAGTTTTCGCGGTATAGAAAAGGTTGCCAACATTGTTGATGCCTTGAAGAACACTACACATAATGGTTTTCCTGTAATGGATGATGGCGTTGAAGTTGAAATAGTAAAATTGCATGGAGTGATTCTAAGGGCACATTTGATAAAAGTGCTTAAGAAGAAGTGGTTTTTGAAAGAGAAAAGGAGAACTGAGGAATGGGAAGTTAGGGAGAAATTTAGTTGGGTTGAATTGGCTGAGAGAGAAGGGAATATTGAAGATGTTGGTGTTACAAAAGATGAAATGGAAATGTTTATTGATCTTCATCCTCTTACTAATACAACTCCTTTTACCGTGTTAGAGAGTATGTCGGTAGCAAAAGCCAGGATTCTTTTCAGACATGTCGGACTTCGTCATATGCTTGTTGTACCGAAGTATCAAGCGTCCGGGGTATCTCCTGTAATTGGAATCTTGACAAGGCAGGATCTACTTAGCTACAACATTCTAGCAGTCTTTCCTCACTTGGCAAAATCTAAGGACAGGAAAAAGAGGAACTGA 2337 0.3804 MGENSSFVMENTSMNENLEEEFEERDPERNPMNEPLLKRNRTLSSNPLALVGAKVSYIESLDYEINENDLFKQDWRSRSRGQVLQYIILKWLLAFLVGLLTGVIATLINLAVENISGYKLLAVVEYIQQKRYLMGFLYFLGTNFILTFIASILCVCFAPTAAGPGIPEIKAYLNGVDTPNMYGATVLFVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGSDNHRIKWKWVRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFALEEVASWWRSALLWRTFCSTAVVVVVLRAFIELCHEGKCGLFGEGGLIMFDVSNVTVSYDVMDIIPVAIIGIIGGVLGSLYNYLLHKILRVYNLINQKGKIYKLLLSLSVSIFTSVCQYGLPFLVKCTPCDDLSMCPTNGKSGNYKQFNCPKGHYNDLATLLLTTNDDAVRNIFSTNTPHEYQPFSILIFFSLYCILGLITFGIAVPSGLFLPIILIGSGYGRLLGIIMRPYTNIDHGLLAVLGAASFMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSVYEMILHLKGLPFMDADPEPWMRNLSVGELIEVKSSVVSFRGIEKVANIVDALKNTTHNGFPVMDDGVEVEIVKLHGVILRAHLIKVLKKKWFLKEKRRTEEWEVREKFSWVELAEREGNIEDVGVTKDEMEMFIDLHPLTNTTPFTVLESMSVAKARILFRHVGLRHMLVVPKYQASGVSPVIGILTRQDLLSYNILAVFPHLAKSKDRKKRN* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4184 778 MobiDBLite consensus disorder prediction 1 35 - -
Mal6g4184 778 Pfam Voltage gated chloride channel 147 558 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal6g4184 778 ProSiteProfiles CBS domain profile. 705 771 IPR000644 -
Mal6g4184 778 PRINTS Chloride channel signature 190 209 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal6g4184 778 PRINTS Chloride channel signature 477 497 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal6g4184 778 PRINTS Chloride channel signature 527 546 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal6g4184 778 PRINTS Chloride channel signature 565 579 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal6g4184 778 PRINTS Chloride channel signature 254 273 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal6g4184 778 PRINTS Chloride channel signature 159 176 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal6g4184 778 PRINTS Chloride channel signature 509 525 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal6g4184 778 MobiDBLite consensus disorder prediction 1 15 - -
Mal6g4184 778 SMART cbs_1 708 761 IPR000644 -
Mal6g4184 778 SMART cbs_1 600 653 IPR000644 -
Mal6g4184 778 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 1 773 - -
Mal6g4184 778 SUPERFAMILY Clc chloride channel 68 580 IPR014743 -
Mal6g4184 778 SUPERFAMILY CBS-domain pair 583 759 IPR046342 -
Mal6g4184 778 CDD ClC_6_like 59 578 - -
Mal6g4184 778 PANTHER CHLORIDE CHANNEL PROTEIN 1 773 - -
Mal6g4184 778 Gene3D - 583 764 IPR046342 -
Mal6g4184 778 Pfam CBS domain 707 759 IPR000644 -
Mal6g4184 778 Gene3D Clc chloride channel 82 580 - -
Mal6g4184 778 CDD CBS_pair_voltage-gated_CLC_euk_bac 598 759 - -
Mal6g4184 778 PRINTS Plant CLC chloride channel signature 275 283 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal6g4184 778 PRINTS Plant CLC chloride channel signature 289 299 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal6g4184 778 PRINTS Plant CLC chloride channel signature 64 72 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal6g4184 778 PRINTS Plant CLC chloride channel signature 429 445 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal6g4184 778 PRINTS Plant CLC chloride channel signature 307 314 IPR002251 GO:0005247|GO:0006821|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4184 Mal-Chr6 120543473 120549383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4184 23 777 Ion Channels AT3G27170 75.623 0.0 1194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4184 K05016 - gmx:778094 1308.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4184 6 120543473 120549383 Mal6g4184 6 120543473 120549383 ECH
Mal3g0976 3 40024930 40029705 Mal6g4184 6 120543473 120549383 PCT