Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4183 ATGGGAGCACCGAAGAAAAGCGCTGCTAGGGTTTCAGACGATAACGATGAACTCGTTCGTGTTCCGTTGCAAGCGATTCTGTTAGCTGATAGTTTCACTACGAAGTTCAGACCTATCACTCTTGAACGCCCCAAAGTGCTTTTGCCGTTGGTGAATGTTCCAATGATAAATTACACATTGACATGGCTTGAATCAGCTGGTGTAGAAGAGGTTTTTGTATTCTGTTGTGCTCATGCGAAGCAGGTGATTAACTATTTGGAGAAATCTGAGTGGTTTAATCAACCTAATTTCACTGTAACAACTATAGAATCACAAAATTCTGTCAGTGCTGGAGATGCACTACGTGTTATATATGAGCGCAATGTGATACAAGGAGACTTTGTCCTTATCAGCGGAGATACTGTAAGCAACATGTCGCTTACTCAGGCACTTTTGGAACACAAAGAAAGGAAGAAGAAAGATAGTAATGCTGTAATGACCATGGTTATCAAACGGTCAAAAACTAATTCAGCTATCCACCAGTCTCGACTTGGTACTGATGAAATTTTCATGGCTATTGATCCTAATACCAAGCAACTTTTGTATTATGAGGATAAAGCAGACTATTCAAAAGGCACTCTACATCTTGAAAATTCATTGCTTGCTGATAATCCTTCCCTCTCTCTGCACCATGACAAGCAGGATTGTTACATTGACATCTGCTCGCAAGAAGTCCTTAGCCTATTTACAGACAATTTTGACTACCAACATCTTCGGCGTCATTTTGTCAAGGGACTGCTTCTTGATGATATAATGGGATACAAAATTTTCACTCATGAAATCCGCTCAGATTATGCTGCAAGGATTGATAATTTCCGAAGCTATGACACTGTCAGCAAAGATATAATTCATAGATGGACATATCCATTAGTACCAGATGTTATGAATTTTGGCAACACAGCTATTAAGCTTGAAAGACAGGGAATATACCGTGCCTCAGAAATTTCGCAATCACAATCAGCTGTTGTTGGCCCGTTCTCTGTTATAGGATCTGGCACCAAAATTGGCAAGAACACTAAGATTTTAAATTCCGTTGTTGGAGAAGGATGCAAAATCGGGTCAAATGTACACATAGAGGGATGCTATATATGGGACAGTGTCACCATAGAAGATGGCTGTGAACTTAGGCATGCCATTGTATGTGATGGGGTGATTATGAAATCAGGATCTGCTCTGGAACCTGGTGTTGTGTTGTCTTTTAAGGTTGTAGTTGGGCAGGACTTTGTTGTTCCTCCTTATTCACAAGTATCTCTACTACAGCAGCCGATTGAGGAAGATAGTGATGAAGAGCTCGAATATGCTGATAGTACTAGTGCCATCACCAGCACAGTGGATAAGTCAGATGGAGAAACTGCTTCCGAATCATTGGATACACATTTTAACCCTGTTTCAGAGCTAGGTTTTGGTGGGGCTGGTCATGTTTGGCCAAAATGTGAAGGAGGCCATGAGGAAGAGTGGAGGCATTCAGTGGCGCCTATTACTGAAGATAAAATTTTGGAGGCAGTGAAAGCTATGGAAGATGAACTAGAGTTAATTCATGATGGCAGTATTCTTCCACCTTCTGGGGAGCTGATACCTAATCCTAATGAATCAGATGAAGATGATGATGATTTAAGAGATGACTTTGACAAAGAGGTTGAAGCAACTTTTCTGAGGGCTGTGCATGAAAACATACAAGAAAACCATTTGACTTTAGAAGTCAATTCCTTGAAGTTGTCATACAATAAGATAGCTGCTGATTGTGCTGGAGCTTTATATTATGCAATGATGAAGTATGCTGTAGACATGCCCCATGGTTCAGCTGATAGCTTGGTTCAGAATGTTCGTGTTGTACTTTCAAAGTGGAAAAAGGTTCTTACATCCTATCTGAATGATACGGACGAGCAGATTGAAGTGATTTTAAAATTTGAAGAAATGTGTTCGGAATCTGCTAAGGAGTTTGCTCCATTGTTCACGAAGATTTTGCACTACATGTATGATGAAGATATTATAGAAGAAGATGCTATTTTGAGTTGGGAAGATGAGAAGAAAGACGCGGATGAGGGGGATAAAGTATTTGTTAACCAAGCCCAACCATTAATTCAATGGCTAAAAGTGGCTCCCGAAGAAGACGATGAAGAGGAAGAATAG 2169 0.4034 MGAPKKSAARVSDDNDELVRVPLQAILLADSFTTKFRPITLERPKVLLPLVNVPMINYTLTWLESAGVEEVFVFCCAHAKQVINYLEKSEWFNQPNFTVTTIESQNSVSAGDALRVIYERNVIQGDFVLISGDTVSNMSLTQALLEHKERKKKDSNAVMTMVIKRSKTNSAIHQSRLGTDEIFMAIDPNTKQLLYYEDKADYSKGTLHLENSLLADNPSLSLHHDKQDCYIDICSQEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIFTHEIRSDYAARIDNFRSYDTVSKDIIHRWTYPLVPDVMNFGNTAIKLERQGIYRASEISQSQSAVVGPFSVIGSGTKIGKNTKILNSVVGEGCKIGSNVHIEGCYIWDSVTIEDGCELRHAIVCDGVIMKSGSALEPGVVLSFKVVVGQDFVVPPYSQVSLLQQPIEEDSDEELEYADSTSAITSTVDKSDGETASESLDTHFNPVSELGFGGAGHVWPKCEGGHEEEWRHSVAPITEDKILEAVKAMEDELELIHDGSILPPSGELIPNPNESDEDDDDLRDDFDKEVEATFLRAVHENIQENHLTLEVNSLKLSYNKIAADCAGALYYAMMKYAVDMPHGSADSLVQNVRVVLSKWKKVLTSYLNDTDEQIEVILKFEEMCSESAKEFAPLFTKILHYMYDEDIIEEDAILSWEDEKKDADEGDKVFVNQAQPLIQWLKVAPEEDDEEEE* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4183 722 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Mal6g4183 722 SUPERFAMILY Trimeric LpxA-like enzymes 267 428 IPR011004 -
Mal6g4183 722 MobiDBLite consensus disorder prediction 528 550 - -
Mal6g4183 722 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 10 721 - -
Mal6g4183 722 SUPERFAMILY Nucleotide-diphospho-sugar transferases 20 369 IPR029044 -
Mal6g4183 722 MobiDBLite consensus disorder prediction 448 469 - -
Mal6g4183 722 Pfam Nucleotidyl transferase 25 165 IPR005835 GO:0009058|GO:0016779
Mal6g4183 722 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 11 303 IPR029044 -
Mal6g4183 722 Gene3D - 542 721 - -
Mal6g4183 722 SMART 542_3 629 716 IPR003307 GO:0005515
Mal6g4183 722 Gene3D Hexapeptide repeat proteins 323 460 - -
Mal6g4183 722 CDD LbH_eIF2B_epsilon 341 419 - -
Mal6g4183 722 SUPERFAMILY ARM repeat 554 711 IPR016024 -
Mal6g4183 722 CDD W2_eIF2B_epsilon 557 711 IPR044123 GO:0005085|GO:0031369
Mal6g4183 722 Pfam eIF4-gamma/eIF5/eIF2-epsilon 641 720 IPR003307 GO:0005515
Mal6g4183 722 ProSiteProfiles W2 domain profile. 545 720 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4183 Mal-Chr6 120468277 120481587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4183 1 713 Eukaryotic Initiation Factors Gene Family AT2G34970 62.379 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4183 K03240 - gmx:100784894 1200.65