Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4178 ATGGCTCCACTCTCACAGGAAACCATAGCAAGGATAAAAGCATACAACTTTTCTCCACTCGCGTTCAAGACTGAACGTGAAGCAACTTTGATGCTTCAACGTCTTGATAAATATCGCGATCTTAGCAGTCCCGGCGTAGCGGCTACCATTGCAACTTTGAATCTTACTCACCAAAAAGTTCAAACCCGAACTCAGAAACTGCTTGCTGAGCAGAAACGGGTTAATAGCACGGTTGCACAAAAGGATGGGACGAAAAGAAAGAAGAATTCAGCTGAAGTAATTGCGGTTAATAGCACGGTTGCACAAAAGGATGGGAAGAAAAGAAAGAAGAATGCACCTGTCTTACCACAATACAACAACATTCTTGCCAACAATCTATATGGTAGGGGATTATCTGGTGTTTCCCAACCTGGCATCGGTGGTAATTTGGTCCCCCCTATTAAATCCAATTTGAGCAATTATTTTGGAAATTATACTTCCCTTGCTAGCATGTTGAGTGGTTCTACAAATAATCAATGTTTGGCTACCCTGCGTGGTCCTGATGGTAAACTTCCTGAGAAATTGAAGAATATATCACCTCAGCACATTCAACATGTCAGTAACGAGATTATGGATAAAAATCCCGATGTTCGCTGGGATGACATAGCTGGATTGACCCATGCCAAAAAATGTGTGAATGAGATGGCAGTATTACCTCTGCGTCGTCCTGACTTATTTATGGGCTGTCGTTCTCCTGGGAGAGGTCTTCTTTTATTTGGTCCACCAGGAACTGGTAAAACAATGATTGGAAAAGCCATAGCTGGGGAGGCAAAGGCAACCTTCTTTTACATATCTGCAAGCTCGTTGACTAGCAAATGGGTTGGTGAAGGTGAAAAGCTAGTAAGAGCCCTCTTTGGAGTGGCTAGTAGTCGTCAGCCAGCAGTAATATTTGTTGATGAAATAGATTCACTCTTGTCTAAGCGTAAATCAGATACGACTCAACATGAAGCATATAGACTTTTAAAGACACAATTTTTTATTGAAATGGAAGGCTTTGCCAGTGGTAACGAGCAAGTCCTGCTTGTTGGCGCAACAAATCGTCCCCAAGATCTTGATGAAGCAGCACGAAGGAGACTTTCTAAACGACTATACATTCCCCTACCATCCTCAGAGGCAAGAGCATCGATTGTACGTCGCCTTTTAGAGAAGGATGGATTATTCAAGCTATCAGATGAGGAAATGGATATTATATGTAGCTTAACTGATGGTTATTCAGGATCGGACATGAAAAACTTAGTGAAGGATGCTTCTATGGGTCCCATAAGAGAGGCATTGGAACAAGGTCTAGATATTATGGAGTTGAAAAAGGAGGATATGAGGCTAGTAACTCTTCAGGACTTCAAGAATTCCCTACAAGAGATAAGGCCTTCTGTTTCACCTAATGAACTTGGCGCTTATGAGCAATGGAACAAGCAATTTGGTAGCTTACCAAATTAG 1476 0.4201 MAPLSQETIARIKAYNFSPLAFKTEREATLMLQRLDKYRDLSSPGVAATIATLNLTHQKVQTRTQKLLAEQKRVNSTVAQKDGTKRKKNSAEVIAVNSTVAQKDGKKRKKNAPVLPQYNNILANNLYGRGLSGVSQPGIGGNLVPPIKSNLSNYFGNYTSLASMLSGSTNNQCLATLRGPDGKLPEKLKNISPQHIQHVSNEIMDKNPDVRWDDIAGLTHAKKCVNEMAVLPLRRPDLFMGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWVGEGEKLVRALFGVASSRQPAVIFVDEIDSLLSKRKSDTTQHEAYRLLKTQFFIEMEGFASGNEQVLLVGATNRPQDLDEAARRRLSKRLYIPLPSSEARASIVRRLLEKDGLFKLSDEEMDIICSLTDGYSGSDMKNLVKDASMGPIREALEQGLDIMELKKEDMRLVTLQDFKNSLQEIRPSVSPNELGAYEQWNKQFGSLPN* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4178 491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 486 IPR027417 -
Mal6g4178 491 Pfam ATPase family associated with various cellular activities (AAA) 249 380 IPR003959 GO:0005524|GO:0016887
Mal6g4178 491 PANTHER AAA DOMAIN-CONTAINING 69 490 - -
Mal6g4178 491 CDD AAA 242 380 - -
Mal6g4178 491 Gene3D - 208 483 IPR027417 -
Mal6g4178 491 Pfam Vps4 C terminal oligomerisation domain 453 487 IPR015415 -
Mal6g4178 491 PANTHER FIDGETIN-LIKE PROTEIN 1 69 490 - -
Mal6g4178 491 ProSitePatterns AAA-protein family signature. 352 371 IPR003960 GO:0005524|GO:0016887
Mal6g4178 491 Gene3D - 381 467 - -
Mal6g4178 491 SMART AAA_5 245 382 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4178 Mal-Chr6 120363464 120367966 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4178 202 489 Calmodulin-binding Proteins AT3G56690 32.192 1.13e-40 154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4178 6 120363464 120367966 Mal6g4178 6 120363464 120367966 ECH