Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4177 ATGGAGGAATCACCGAAAAACTGTTGGAGAAAGGAAGCAGATGAGAATCTGAAGAGATTACACTCTCTCTTGTTCGGTGCTGAACACGCTTTAGATGAAAACCACCGCGATTACTCTTCCGCTTATATTCTCTCTCTTCGTCTTCTCGGATTTCTCGATTCTCGCTCTCAATCGGAAATCGATGAAGCTTTCATTCAACACATTCGGAGTCAAGCTTTAACCTATCTTCATACCGCGAGAAAATCTCTTACTCCGAGCATTAATCGCCAAGCTTTTGAGCAAGCAAAGAGGTCTCCAGGACCTGTTTTTAGCACAACAGGAGATATTGACATTGACAAGATACGGAACTCTAAGTACTTTCAAGCTCTTCTCAAGCCATCTAAAGAAAAAGATTGTAATCAATTGGTTGATCAGCTAGGGAAGCAAAACAAAACAGGAGGGGAAGCATCAAAGGAAGTGGTGCAAGCGAAGATAACATCCATATATGGGAAAAGCAGCTTGAGGGCTAGTAATGGTTCCAAAAATTTTTTCAACTTGAAAGATAACACCTCTGAGGACTGCACAATTATTGGAAGGCCTCAATCCCATCCCATCCATACAAAGGGTCCTGGTGTCTCATCCATTTTTGAAGTTGAAGGAGAAGAAAGAGCTTGTGGAAACACTTTTTCTACAAAACGTGCCCACACGGAAAATAATAGCCCCAGAGTTGGTTATGTCAAGCCACCTTCAAGCAAGGAGGAAGTTAATCCTGATGTTAGTGGCTGCGGGTTTGTTACTGCCAGAGCAAAGTTGGAAATGGACGTAAAGCAAAAGCGAGGTGTAATTGGTTCACCCAATGCACCTGTCTCACCACAATGCGACAACAATCCTGCTAACAGGATATATGGTGGGAGATCTTATGGTGTTTCACGACGTGGCATCCGTGGTAATTTTGTCCCCCCTATTAAATCTAATGGGAGCAATACTGGAAATATTACTTCCCAAATCGCTGGCAACAAGTGTGATGATTCTTTAGACGAGTCTACAAAGAAATGTTTGGAAATCCTGTGTGGTCCTGATGGTGAACTTCCTGAGAAATTGAGGAATTTAGAACCTCGCCTCATTGAACATGTTAGTAACGAGATTATGGATAAAGATCCCAATGTACACTGGGATGACATTGCTGGATTGGCCCATGCCAAAAGTTGTGTCAATGAGATGGTCATATTTCCTCTGCAACGTCCCGACTTATTTACGGGCTGCCGTTCTCCCGGGAAAGGTCTGCTTCTCTTTGGTCCACCAGGAACTGGAAAAACAATGATAGGAAAAGCCATAGCTGGGGAGGCAAAGGCTACCTTCTTTTACATATCTGCAAGCTCGTTGACTAGCAAGTGGATTGGCGAAGGTGAAAAGCTAGTAAGAGCCCTCTTTGGAGTGGCCAGTTGTCGTCAGCCAGCAGTAATTTTTGTTGATGAAATAGATTCGCTTTTGTCTCAGCGTAAGTCAGATGGTGAACATGAATCAAGTAGACGGCTAAAGACACAGTTTCTTATTGAAATGGAAGGCTTTGACAGCGGTAACGAGCAAGTTCTGCTTATAGGGGCAACAAATCGTCCCCAAGAGCTTGATGAAGCAGCACGAAGGAGACTTACTAAACGACTTTACATTCCCCTGCCATCCTCAGAGGCAAGAGCTTGGATTGTACGTAGCCTTCTAGAGAACGATGGATTATTCAATCTATCAAATGAAGAAATGCAGATTGTATGCGACTTAACGAAAGGTTATTCAGGATCAGACATGAAAAACTTAGTGAAGGATGCTGCTATGGGTTCCATAAGAGAGGCAATAAGACACGGTGCAAAAGTTGTGAACTTGGAAAAAGAGAAGATTAGACCAGTAACTCTTCAGGACTTCAAGAATTCCCTGAAAGATATAAGGCCTTCTGTTTCACCTGATGAACTTGGCACTTATGAGCAATGGAACAAACAATTTGGAAGCTTAGCAGTTTAG 1989 0.4294 MEESPKNCWRKEADENLKRLHSLLFGAEHALDENHRDYSSAYILSLRLLGFLDSRSQSEIDEAFIQHIRSQALTYLHTARKSLTPSINRQAFEQAKRSPGPVFSTTGDIDIDKIRNSKYFQALLKPSKEKDCNQLVDQLGKQNKTGGEASKEVVQAKITSIYGKSSLRASNGSKNFFNLKDNTSEDCTIIGRPQSHPIHTKGPGVSSIFEVEGEERACGNTFSTKRAHTENNSPRVGYVKPPSSKEEVNPDVSGCGFVTARAKLEMDVKQKRGVIGSPNAPVSPQCDNNPANRIYGGRSYGVSRRGIRGNFVPPIKSNGSNTGNITSQIAGNKCDDSLDESTKKCLEILCGPDGELPEKLRNLEPRLIEHVSNEIMDKDPNVHWDDIAGLAHAKSCVNEMVIFPLQRPDLFTGCRSPGKGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDSGNEQVLLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIVRSLLENDGLFNLSNEEMQIVCDLTKGYSGSDMKNLVKDAAMGSIREAIRHGAKVVNLEKEKIRPVTLQDFKNSLKDIRPSVSPDELGTYEQWNKQFGSLAV* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4177 662 MobiDBLite consensus disorder prediction 225 251 - -
Mal6g4177 662 Gene3D - 380 654 IPR027417 -
Mal6g4177 662 Gene3D - 552 638 - -
Mal6g4177 662 PANTHER AAA DOMAIN-CONTAINING 93 659 - -
Mal6g4177 662 Pfam AAA+ lid domain 584 620 IPR041569 -
Mal6g4177 662 ProSitePatterns AAA-protein family signature. 523 542 IPR003960 GO:0005524|GO:0016887
Mal6g4177 662 SMART AAA_5 417 553 IPR003593 -
Mal6g4177 662 CDD AAA 414 551 - -
Mal6g4177 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 380 657 IPR027417 -
Mal6g4177 662 Pfam ATPase family associated with various cellular activities (AAA) 421 551 IPR003959 GO:0005524|GO:0016887
Mal6g4177 662 PANTHER FIDGETIN-LIKE PROTEIN 1 93 659 - -
Mal6g4177 662 Pfam Vps4 C terminal oligomerisation domain 623 658 IPR015415 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4177 Mal-Chr6 120344245 120351860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4177 358 661 Calmodulin-binding Proteins AT3G56690 32.686 1.63e-40 157