Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4153 ATGGATATACACTTTGTGCGTGAAAAATTTGCTCGCGGTCAGGTGCGTGTATTACATGTTCCCTCTTGTTATCAAATTGCCGATATCTTCACGAAGGGGCTTCCGCTACAACTTTTTGACGATTTTAGGGATATTTATCATTTATCATTCATCAATAATATCAGTTTATCGTTTATCATTGTATCCATTACTTTCTTAAATACCAAAGATCTATCAGATTGCTTGGGTTGCACTCTAAACTCCATAGCCAGGGACATGGGCTTTATCACAGCTCAAGAGCGCTCCGATTCGTCATTGCGTAGTGGATTTTCTTTCATAAATAGCACGGTAAAAGGCAGCAGACTTGTTTATCTTGGAAGACCATGGGGTAATTATTCAAGAGTTGTTTTCTCTTATACCTTCATGGACAAAAATGTTCTCCCCAAAGGATGGGAAGATCATTTTGGTAACGCAGAGAAGAACGTGACAAAGATATATTATGGTGAATACAAATGCAGTGGACCTGGATCCAACTTCGCCAAAAGAGCTCCATGGGTACGACATCTGACAGACGAAGAGGCCCAACAATTCATCAGCATACAATTCATCCAAGGAGATACTTGGCTCATTAGCCCTCCTTATTAA 624 0.4006 MDIHFVREKFARGQVRVLHVPSCYQIADIFTKGLPLQLFDDFRDIYHLSFINNISLSFIIVSITFLNTKDLSDCLGCTLNSIARDMGFITAQERSDSSLRSGFSFINSTVKGSRLVYLGRPWGNYSRVVFSYTFMDKNVLPKGWEDHFGNAEKNVTKIYYGEYKCSGPGSNFAKRAPWVRHLTDEEAQQFISIQFIQGDTWLISPPY* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4153 207 Pfam Pectinesterase 77 199 IPR000070 GO:0030599|GO:0042545
Mal6g4153 207 PANTHER PECTINESTERASE 60 203 - -
Mal6g4153 207 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 60 203 - -
Mal6g4153 207 Gene3D - 57 205 IPR012334 -
Mal6g4153 207 SUPERFAMILY Pectin lyase-like 54 202 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4153 Mal-Chr6 118890305 118891736 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4153 75 206 Carbohydrate Esterase AT1G69940 39.850 5.78e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4153 K01051 - gmx:100778999 174.096