Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4138 ATGTCATTCTTATTTATAGATATAATTTGTGAAACTGAGCATTGTACTAATACTAAACTAGGTGTAACTTGTTTCATAGGGGTACATATAGCAAACATCACAGAAAATGCTTACACATTTATGAGACTTCACGTGTACGGTGACCCAATTCCTGTCAAGGAACTCGCTGATCGCGTGGCTAGTTATGTGCACCTCTATTGGACGTTTGAAATTGAAAATTGTGTGACGTATTACTTTTGGTCGGTTCCGGATTTCGGGACCGAATCCGACCGGAACCGACCGTTTAGTATCTTACAATTAGGACTGTGTGCGTATTTCAAACTGTTGTATTGTTTGTATGTCATTGTGCAGGGTATTGACCCAAAATTAAGAGAAGCTGAAAGAAAAAAGTTAACAATTAATGTTAGCCAAAGGGGCACAGCCCAATTCAAGAGCATTTCCGAAGCGCTCCACAGCATTCCTCAACCGAACACCAGGAGGATTGTTATCTCCATAGGCCCAGGAGTTTACAGGGAGAAGATTGTTATCCCCTCTTCATTGCCGTTCATTACATTCTTAGGGGATGCAATGAATGAACCTTTTATTACTGGGAGTGATAGATCACGTACCATAGGACGTGATGGGAAGCAATTGGGGACACATAATAGTGCAACTGTGGCTGTGGATTCTGACTATTTCATGGCAATCAACATGAAGTTTCAGAACACTGCATCACCACCTCCCATTGGATCAAACAACGATCAAGCTGTTGCACTTCGCACTTCTGGAAACAAAAGTGCCTTTTACAATTGCTCTTTCTACGGGTTCCAAGACACGTTATATGATCACCAAGGCTATCACTATTTTAAAAGTTGCTTTATTCAAGGCTCGGTCGATTTCATCTTCGGCCATGGGAGATCTCTTTACGAGGGCTGCACTATAAACTCAATCACGAAGAAGATGGGCTTTATCACTGCACAAGACCGCCTATCATTGTCATCGGACAGTGGATTTTCCATTCAAAATAGCAAAGTAATCGGTAGTGGGCAAGTTTATCTTGGACGACCATGGGGAGATTATTCAAGAGTCGTTTATTCATACACCAGCATGGACAAGATTGTTCTCCCCCAAGGATGGGATGATACTATGAATACTCATAATCGCAGCTTGACAGCATATTATGGAGAGTACAAGTGTAGTGGTCCTGGATCCAACTTAGCTGGAAGACCTCCTTGGGTTCATAGACTAACAGACACAGAGGCACAACAATTTATTGGCACACAGTTCATTGAAGGGGATACTTGGCTGATCAGCCCTAATTAG 1302 0.4217 MSFLFIDIICETEHCTNTKLGVTCFIGVHIANITENAYTFMRLHVYGDPIPVKELADRVASYVHLYWTFEIENCVTYYFWSVPDFGTESDRNRPFSILQLGLCAYFKLLYCLYVIVQGIDPKLREAERKKLTINVSQRGTAQFKSISEALHSIPQPNTRRIVISIGPGVYREKIVIPSSLPFITFLGDAMNEPFITGSDRSRTIGRDGKQLGTHNSATVAVDSDYFMAINMKFQNTASPPPIGSNNDQAVALRTSGNKSAFYNCSFYGFQDTLYDHQGYHYFKSCFIQGSVDFIFGHGRSLYEGCTINSITKKMGFITAQDRLSLSSDSGFSIQNSKVIGSGQVYLGRPWGDYSRVVYSYTSMDKIVLPQGWDDTMNTHNRSLTAYYGEYKCSGPGSNLAGRPPWVHRLTDTEAQQFIGTQFIEGDTWLISPN* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4138 433 Pfam Pectinesterase 133 426 IPR000070 GO:0030599|GO:0042545
Mal6g4138 433 ProSitePatterns Pectinesterase signature 2. 287 296 IPR033131 -
Mal6g4138 433 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 117 430 - -
Mal6g4138 433 PANTHER PECTINESTERASE 117 430 - -
Mal6g4138 433 Gene3D - 127 432 IPR012334 -
Mal6g4138 433 SUPERFAMILY Pectin lyase-like 130 429 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4138 Mal-Chr6 118392763 118423677 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4138 133 429 Carbohydrate Esterase AT5G47500 44.781 1.15e-88 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4138 K01051 - qsu:112011696 417.542