Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4136 ATGGATCATATACTTTTCATTCTTCACTTTTTCTTGTTTCTTTTGATTCAGTCATCATCAACTGATTCAGTCAAGGGTATTGATCCAAAACTAAAGGAAGCGGAAAGTAATAAAGAAACAATTCATGTTAGTCAAAGGGGTGCAGCTCAGTTCAAGAGCATTTCGGAAGCGCTCCACAGCATTCCACAACCGAACACCAAGAGGATTATTATTTCCATAGGCCCTGGAGTTTACAGGGAGAAAATTGTGATCCCCATCACATTGCCTTTTGTAACATTCTTAGGGGACACAAAGGGTAAATCAACTATTACTTGGAATGATGCAAATTCTACCATCGGAAGTGATGGGAAACCGTTGCTGACCTACAAGAGTGCAACTGTTGCAGTGGAGGGTGATTATTTTATAGCCAGCAACATGATATTTGAGAATACTGCTTCATACTTTACATCGAAGGTGGAACAAGCTGTTGCACTTCGAGTCACCGCAAACAAATCTGCCTTTTTCGATTGCTCGTTCTATGGGGTTCAAGACACTCTATATGATCACGAAGGATTCCACTATTTTAAAACTTGCTATATTCAAGGAGCTGTTGATTTCGTCTTTGGTCATGGGAGGTCCCTTTATGAGGGTTGCACTCTAAACTCCATAGCCAAAGGCGTGTCTTTTATCACAGCTCAACAGCGCTCCATTTCGTCATTGGAAAGTGGATTTTCCTTTGTAAATAGCACGATAACAGGCAGTGGACTTGTTTATCTTGGTAGACCATGGGGAGAGTATTCAAGAGTTGTTTACTCTTATACTTACATGGACACAAATGTTCTCCCCAAAGGATGGGATGATCATTTTGGTAACGCAGAGAAGAACGTGACAAATATATATTATGGAGAATACAAATGCAGTGGACCTGGATCCAACTTAACCGAAAGAGCTCCATGGGTACGGAGTCTTACAGACAAAGAGGCCCAACCATTCATCGGCATACAATTCATCGAAGGAGATACTTGGCTCTCTAGCCCTCTTTAA 1023 0.4125 MDHILFILHFFLFLLIQSSSTDSVKGIDPKLKEAESNKETIHVSQRGAAQFKSISEALHSIPQPNTKRIIISIGPGVYREKIVIPITLPFVTFLGDTKGKSTITWNDANSTIGSDGKPLLTYKSATVAVEGDYFIASNMIFENTASYFTSKVEQAVALRVTANKSAFFDCSFYGVQDTLYDHEGFHYFKTCYIQGAVDFVFGHGRSLYEGCTLNSIAKGVSFITAQQRSISSLESGFSFVNSTITGSGLVYLGRPWGEYSRVVYSYTYMDTNVLPKGWDDHFGNAEKNVTNIYYGEYKCSGPGSNLTERAPWVRSLTDKEAQPFIGIQFIEGDTWLSSPL* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4136 340 Pfam Pectinesterase 41 333 IPR000070 GO:0030599|GO:0042545
Mal6g4136 340 ProSitePatterns Pectinesterase signature 2. 193 202 IPR033131 -
Mal6g4136 340 Gene3D - 34 339 IPR012334 -
Mal6g4136 340 PANTHER PECTINESTERASE 23 336 - -
Mal6g4136 340 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 336 - -
Mal6g4136 340 SUPERFAMILY Pectin lyase-like 39 337 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4136 Mal-Chr6 118352500 118357301 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4136 36 337 Carbohydrate Esterase AT5G47500 44.737 1.41e-92 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4136 K01051 - pvy:116132618 411.379