Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4108 ATGGATCATTACAAGGTTCTAGGGTTACACAAAACAGCATCCAAAGAAGAAATCAAAACCGCATTCAAAAAACTCGCGTTTCAATTTCATCCTGATAAGCATTCTCAATCATCCAAATCCGTTAGAGAAAATGCAACAATTCGATTCAAGCAGGTTTCTGAAGCTTATGAGGTTCTCATGGATGATCGGAAACGCGCTGAGTATAATTTCCGGTGGAGGTCCGGTGCCGGTGGAGGAAGTTCCGGTGCCGGTGGAAGTGCCAGTAACTATTATTCTCAGTATGGTTATGGATATGGTAGAAGTGGGAGTGGATATGAGTATAAATATAGGTCTGGTGGTGGTAGTAGTGGTGGTGGTTTTGGGGATAAATTTGGAGTTTTTATTCGGATTTTGACGGCGAGGTCTTCGCTTCTTAATCTTGGATTCGCAGCAAATCTTTTGAAGAAGCCATGA 453 0.4238 MDHYKVLGLHKTASKEEIKTAFKKLAFQFHPDKHSQSSKSVRENATIRFKQVSEAYEVLMDDRKRAEYNFRWRSGAGGGSSGAGGSASNYYSQYGYGYGRSGSGYEYKYRSGGGSSGGGFGDKFGVFIRILTARSSLLNLGFAANLLKKP* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4108 150 CDD DnaJ 2 61 IPR001623 -
Mal6g4108 150 PANTHER CHAPERONE PROTEIN DNAJ 72 1 147 - -
Mal6g4108 150 PANTHER CO-CHAPERONE PROTEIN DJLA 1 147 - -
Mal6g4108 150 PRINTS DnaJ domain signature 22 37 IPR001623 -
Mal6g4108 150 PRINTS DnaJ domain signature 64 83 IPR001623 -
Mal6g4108 150 PRINTS DnaJ domain signature 44 64 IPR001623 -
Mal6g4108 150 PRINTS DnaJ domain signature 4 22 IPR001623 -
Mal6g4108 150 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Mal6g4108 150 Gene3D DnaJ domain 1 130 IPR036869 -
Mal6g4108 150 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
Mal6g4108 150 SUPERFAMILY Chaperone J-domain 1 101 IPR036869 -
Mal6g4108 150 Pfam DnaJ domain 2 69 IPR001623 -
Mal6g4108 150 SMART dnaj_3 1 64 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4108 Mal-Chr6 117364579 117367756 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4108 3 69 C2H2 Transcription Factor Family AT1G74250 41.791 3.83e-12 60.8