Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4107 ATGGATCATTACAAGGTTCTAGGGTTACAGAAAACAGCATCCAAAGAAGAAATCAAAACCGCATTCAAAAAACTTGCGTTTCAATTTCATCAAGATAAGCATTCTAAATCACCAAAATCGGTTAAAAAAAATGCAACAATTCAATTCAAACAGGTTTCTAAAGCGTATGAGGTTCTCATGGATGATTGCAAAAGCGCTGACTACAATTTCCGGTCGCAGGCCGGTGGTGGTTCAAAGTCTAGTAATGGATCATATGGTAGAAGTGGGAGTGATTATGGATATAAAACTAGGTCTGGTGGGTTTAATGGTGGTGTTGGTTATTATTTAAAGTATGGTTCTGGACATGGTGGAAGTGGATTTGGAGATAAAACTAGGTATGGTGGGTTTAATGGTGGTGGTGGTGGTTTTAGGGATAAATGTGGAGCTGTTATTCGGACTTTGACGACGAGGTCTTCTCTTCTTAATCTTGGATGTGCAGCGTAA 483 0.3934 MDHYKVLGLQKTASKEEIKTAFKKLAFQFHQDKHSKSPKSVKKNATIQFKQVSKAYEVLMDDCKSADYNFRSQAGGGSKSSNGSYGRSGSDYGYKTRSGGFNGGVGYYLKYGSGHGGSGFGDKTRYGGFNGGGGGFRDKCGAVIRTLTTRSSLLNLGCAA* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4107 160 PRINTS DnaJ domain signature 4 22 IPR001623 -
Mal6g4107 160 PRINTS DnaJ domain signature 22 37 IPR001623 -
Mal6g4107 160 PRINTS DnaJ domain signature 44 64 IPR001623 -
Mal6g4107 160 CDD DnaJ 2 61 IPR001623 -
Mal6g4107 160 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
Mal6g4107 160 SUPERFAMILY Chaperone J-domain 1 75 IPR036869 -
Mal6g4107 160 SMART dnaj_3 1 64 IPR001623 -
Mal6g4107 160 Pfam DnaJ domain 2 69 IPR001623 -
Mal6g4107 160 PANTHER CHAPERONE PROTEIN DNAJ 72 1 159 - -
Mal6g4107 160 PANTHER CO-CHAPERONE PROTEIN DJLA 1 159 - -
Mal6g4107 160 Gene3D DnaJ domain 1 132 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4107 Mal-Chr6 117359651 117360133 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4107 3 73 C2H2 Transcription Factor Family AT1G74250 43.056 3.45e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4107 - - mtr:MTR_6g027110 156.377