Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4097 ATGGGAAGTAGAAAGGAAGAAGAGAAGATTGAGAAAATTATTAGGGGGCTTATGAAGCTTCCGCCGAATCGAAGATGTATCAACTGTAATAGTTTGGGACCTCAGTATGCATGTACAACTTTTTGGACCTTCGTTTGCATTACTTGCAGTGGAATACATCGCGAGTTTACTCATCGTGTGAAGTCTGTGTCAATGTCAAAGTTCACTTTCCAAGAAGTTGATGCTCTTCAAAATGGTGGTAACCAGCGTGCAAGGGATTTATATTTGACAAATTGGGACTTCCAAAGACAACGGTTGCCAGATAGCAGCAATGTTGCTAAAGTAAGGGAGTTCATAAGGAATGTATATGTGGATAAAAGATATGCTGGAACAAAGTCATCTGAAAAGCCTCCAAGAGATTCACAGAGCCCCACCATTCATGACGACGAGATTAGGCGTGCCAGTTCTTATCATTCATATTCACAAAGTCCTCCGTATGATAATCAATATGAGGATCGACGCTACGGAACACAAGCAGGGGCTCTGACAAGGAAGCCTGGTTCAGATAAAGTCCGTTATGAAGGGAAGATGTCTAGTATTATCTATAGTCCTGGTCGTTTCAGTGATCACGCATATGATGACAGATTTGCTAATGAGGGATCTGGGCCAAGAAATTCTGACTTTTCTGTGTCTAGTGGTCATGAGCAATTCAAATCTGATGTTCAGTCTCCTAAGTTTGAGTTTAACAGTCCATCTTATAAGCGTCCTGGTTCTAGTTCAAGCGAAGATGTGTGGACTCAAGCAAAAATTGCAGCTCTTGAATCTAATGCCGCTGCCAAGAGAGATGCAGAAGGAATGCATCGTCCGCAGAGAACAACATCATTGCAACCGACAGACAGCAACCTTTCGACCTTAAGATCTTACAATTCTGGTGGTGCAGTTGATTTTTTCTCAGAAGCTTTCCAATCTTCAGGGTCCCTTCAAGATAAAGCATTAGGAAATTCACTGCCGTCTGGTCCTGCAAGATCTGTTAGCTTGGACCTTTCCAAGGCACCAGCGGCATCAGCTTCATCTGTTGATCTTTTTCAAACAACAGCACGATCTCAAGCTGCATTGGGAGATCTGTTTCAAATATCTGATAAGGAAGCAGCTCCATCCTTCAAGGGAATTCAACCTACACAAACATCCCAAGTTGTATCTATTGATTTCTTTGCGGATCTTCCTCAGCCACCTTCTGCTGCAACCTCAGATGCAAAATCACCGGAGTTATCCGTCCCTAAAAATGAAGGGTGGGCAACATTTGATGCGCCTCAGTTCACATCATCTACTGCACAAGTGGAAATTCCTGCGACAGTACCTCCAAGTGCTGAATCTTTGCAGGATAGATTTGATCCATTTTCAACGTTTAATGCAAATATGCAAATGCCATCTTTTGAAATGCCTAGTGTCGGTGTACCTTCTTCTGTTACATCTAATATATGGCACGATGGTGTATGGAATGGAGAAAAACAAGTTCCTGTTATGGCAACAGAGACTCAACCATGGAATGCATTTGGAGATTCTGGTACCCATCTTCCAGTGGACGGCGATAGTCAAGGATTACAATTGCACAATTTCCCATCAGAAAGTTTTGGTTCAAGTGCTTCTGAGGTGCCCAATAAAGATGGAATCAAAGGCGTTGCTCCTATTGGCGGATTTGATAATCATGAATTCCCATCAAATGGAGATATTCAACCTAATGGAATCAATCGCAAATCAACTAATCCATTTGATTTTCCCTTTGATTCTGATGTAGAACAGAACAATATGTTTCTTGATATGAGTTCTCTGCAAGCTGCTCTGCCAGACGCCCTATTGCCAGCCCCATTTGGTGGTATCGCTGAACCTTGGCTCCCCCAAAATACAGCGACCCCATATATTTCCTCTACAGGAGAAGGTGGTTTTTCATTCATGGCCGTGCACACACCAAGTTCTCCATTACAGAACATCCAAGTACAGGAACCAGTTGCTCCGATCGGGGGAAATCCTTTTGCATAG 2016 0.4291 MGSRKEEEKIEKIIRGLMKLPPNRRCINCNSLGPQYACTTFWTFVCITCSGIHREFTHRVKSVSMSKFTFQEVDALQNGGNQRARDLYLTNWDFQRQRLPDSSNVAKVREFIRNVYVDKRYAGTKSSEKPPRDSQSPTIHDDEIRRASSYHSYSQSPPYDNQYEDRRYGTQAGALTRKPGSDKVRYEGKMSSIIYSPGRFSDHAYDDRFANEGSGPRNSDFSVSSGHEQFKSDVQSPKFEFNSPSYKRPGSSSSEDVWTQAKIAALESNAAAKRDAEGMHRPQRTTSLQPTDSNLSTLRSYNSGGAVDFFSEAFQSSGSLQDKALGNSLPSGPARSVSLDLSKAPAASASSVDLFQTTARSQAALGDLFQISDKEAAPSFKGIQPTQTSQVVSIDFFADLPQPPSAATSDAKSPELSVPKNEGWATFDAPQFTSSTAQVEIPATVPPSAESLQDRFDPFSTFNANMQMPSFEMPSVGVPSSVTSNIWHDGVWNGEKQVPVMATETQPWNAFGDSGTHLPVDGDSQGLQLHNFPSESFGSSASEVPNKDGIKGVAPIGGFDNHEFPSNGDIQPNGINRKSTNPFDFPFDSDVEQNNMFLDMSSLQAALPDALLPAPFGGIAEPWLPQNTATPYISSTGEGGFSFMAVHTPSSPLQNIQVQEPVAPIGGNPFA* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4097 671 MobiDBLite consensus disorder prediction 282 296 - -
Mal6g4097 671 Pfam Putative GTPase activating protein for Arf 12 122 IPR001164 GO:0005096
Mal6g4097 671 PANTHER ARFGAP/RECO-RELATED 1 671 IPR044820 GO:0005096
Mal6g4097 671 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Mal6g4097 671 PRINTS HIV Rev interacting protein signature 60 81 IPR001164 GO:0005096
Mal6g4097 671 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Mal6g4097 671 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD14-RELATED 1 671 - -
Mal6g4097 671 CDD ArfGap_AGFG 15 121 - -
Mal6g4097 671 MobiDBLite consensus disorder prediction 215 254 - -
Mal6g4097 671 MobiDBLite consensus disorder prediction 206 254 - -
Mal6g4097 671 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 129 IPR001164 GO:0005096
Mal6g4097 671 Gene3D Arf GTPase activating protein 2 133 IPR038508 -
Mal6g4097 671 SMART arf_gap_3 11 129 IPR001164 GO:0005096
Mal6g4097 671 MobiDBLite consensus disorder prediction 144 164 - -
Mal6g4097 671 SUPERFAMILY ArfGap/RecO-like zinc finger 10 122 IPR037278 -
Mal6g4097 671 MobiDBLite consensus disorder prediction 271 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4097 Mal-Chr6 117038775 117047697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4097 14 137 C2H2 Transcription Factor Family AT3G07940 30.597 2.32e-11 63.2