Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4093 ATGAGTTCACCAAACTTGAACAATGATGGTTATGGTTTCTCTTTGGACTTGAATATTTCACTTTTTTCTCAACTTCCATCTTCATCTTCTACTCCCCTTTTGGGTCATGTTGGTAACAATGAGTCTTTAGTGATCCATCAAGATGAGAGCATGGTCCAGAACAACGAAGAAAATGAGAAATTTGAGAACACTAAGCTTTCCAGTAAACCTCACTGGAGACCTTTTGAAGATGCTAAGCTTAAAAAGCTTGTTGATGAATTTGGTCCTCGCAATTGGAAGAACATTGCTGAAGAAATAGATGGAAGATCATGGAAAAGCTGCAGATTAAGGTGGTATAATCAGCTAGATCCTAGCATTAATCATGCACCTTTAAGTAAGGAAGAAGAAGATAAGCTTTTGAAGGCTCATACACTTCATGGTAACAAATGGGCAAAGATTCGCAAATTCTTTCATGGAAGGACAGACAATGCACTGAAGAATAATTTTCATGTGATCATGGCTAGGAAGGAAAGGGAACTATTATCATCTATTTCAAGAGAGAATAATGTAGCCATCACAAGTACCATTGATGAATCTAACTCAACTTGCACCAATCTCAACTTCACTACTAGGCCTTTACTTAATTACCAAGCCTATGGTTCACAAATGGGTTTACTTGGAGAAAGAAAGGTAGAAGCAAGGGATGATTTTGCCAAAAGTTGCCATGCAATGAGAAGTTATTCTGAAGGTCACATTGGAAAGCTTAAGAGTGTGGACCAATCCAATCAATCATCTGAGTCAGTTGCAACAAACATGAACAATGGATCAAATTTGGGGGAAAATCAAAATGTGAGAGATAAGATTAAGAGGTCATTTATTGACTTTCTTGGAGTAGGTGATACATAG 885 0.374 MSSPNLNNDGYGFSLDLNISLFSQLPSSSSTPLLGHVGNNESLVIHQDESMVQNNEENEKFENTKLSSKPHWRPFEDAKLKKLVDEFGPRNWKNIAEEIDGRSWKSCRLRWYNQLDPSINHAPLSKEEEDKLLKAHTLHGNKWAKIRKFFHGRTDNALKNNFHVIMARKERELLSSISRENNVAITSTIDESNSTCTNLNFTTRPLLNYQAYGSQMGLLGERKVEARDDFAKSCHAMRSYSEGHIGKLKSVDQSNQSSESVATNMNNGSNLGENQNVRDKIKRSFIDFLGVGDT* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4093 294 MobiDBLite consensus disorder prediction 251 275 - -
Mal6g4093 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 119 IPR017930 -
Mal6g4093 294 ProSiteProfiles Myb-like domain profile. 72 115 IPR001005 -
Mal6g4093 294 SMART sant 120 168 IPR001005 -
Mal6g4093 294 SMART sant 68 117 IPR001005 -
Mal6g4093 294 Pfam Myb-like DNA-binding domain 72 132 - -
Mal6g4093 294 CDD SANT 72 113 IPR001005 -
Mal6g4093 294 SUPERFAMILY Homeodomain-like 69 162 IPR009057 -
Mal6g4093 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 120 170 IPR017930 -
Mal6g4093 294 PANTHER OS08G0435700 PROTEIN 50 294 - -
Mal6g4093 294 Gene3D - 123 186 - -
Mal6g4093 294 CDD SANT 125 160 IPR001005 -
Mal6g4093 294 ProSiteProfiles Myb-like domain profile. 116 166 IPR001005 -
Mal6g4093 294 PANTHER MYB PROTEIN-RELATED 50 294 - -
Mal6g4093 294 MobiDBLite consensus disorder prediction 251 276 - -
Mal6g4093 294 Gene3D - 69 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4093 Mal-Chr6 116966874 116968552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4093 61 292 MYB Transcription Factor Family AT4G33450 41.564 4.09e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal6g4093 Myb_DNA-bind_6 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4093 K09422 - jre:109000849 218.779