Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4089 ATGGAAGATCAACAACAAAAACAAGGTGTTCAGTCTCAAAGTTCCAATACCAATAATCCAAACAACACTGAAAAGAGTGAAACTGTGAGATCAAGATGGACACCAAAACCTGAACAAATCCTTATTCTTGAGTCCATTTTCAACAGTGGAATGGTTAATCCACCAAAAGATGAAACCATTAGAATAAGACAACTTCTTGAGAAATTTGGAGCTGTTGGTGATGCTAATGTTTTTTATTGGTTTCAGAATCGCCGCTCTCGCTCTAGACGCCGTCAGAGACAGATGCAGGCTGCTGCCCAACTAGCCTCTGGCGGTGCAAATCCATACCACCAATACCAGTGCAGCACCAACGGTAACTCTCTATCTCTTGGTGCTGCACTTGGTTTTGGTGGTTCCTCAAATTTTACTATGAGCTCTTCTTCATGTTCATCTTATAATAATAACTTTTTGGGTTCTTCTTCATCATGTGCTGGTGGTGTTGGTGTTGGAGTTGGTGTTGGTCCTGGTGCTGGAGTAGAAGGGTTTGGTGGTTTGTTCTTAGGTTCTTCTACTCAAATTAATTTTCCTCAAATGGAAAATACTTCAGCTGCTTCATCAATTTTGCAGCCTTCTGATCATGCTTCGAATTTCAGCTATTACCCAGGGGGAATAGCATTTGGGGGAAGTAATGTTTCAGGTGTGATCACAGTGTTTATCAATGGGATTGCAACAGAAATGCCAAGGGGTGCAATTGACATGAAAACAGTGTTTGGTGAAGATGTAATGTTGGTTCATTCTTCTGGAGTCACAGTTCCAACCAATGAGTTTGGTTTCTTGATGCAGAGCTTGCAGCATGGTGAAAGCTACTTTCTGGTGTCAAAGCAGACACAAGCATGA 876 0.4167 MEDQQQKQGVQSQSSNTNNPNNTEKSETVRSRWTPKPEQILILESIFNSGMVNPPKDETIRIRQLLEKFGAVGDANVFYWFQNRRSRSRRRQRQMQAAAQLASGGANPYHQYQCSTNGNSLSLGAALGFGGSSNFTMSSSSCSSYNNNFLGSSSSCAGGVGVGVGVGPGAGVEGFGGLFLGSSTQINFPQMENTSAASSILQPSDHASNFSYYPGGIAFGGSNVSGVITVFINGIATEMPRGAIDMKTVFGEDVMLVHSSGVTVPTNEFGFLMQSLQHGESYFLVSKQTQA* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4089 291 SUPERFAMILY Homeodomain-like 24 98 IPR009057 -
Mal6g4089 291 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 288 IPR044558 GO:0003700|GO:0048830
Mal6g4089 291 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 288 - -
Mal6g4089 291 MobiDBLite consensus disorder prediction 1 33 - -
Mal6g4089 291 Gene3D - 30 98 - -
Mal6g4089 291 ProSiteProfiles 'Homeobox' domain profile. 26 91 IPR001356 GO:0003677
Mal6g4089 291 MobiDBLite consensus disorder prediction 1 28 - -
Mal6g4089 291 SMART HOX_1 28 95 IPR001356 GO:0003677
Mal6g4089 291 Pfam Homeodomain 30 90 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4089 Mal-Chr6 116761350 116764175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4089 13 289 Wox Gene Family AT5G17810 49.658 4.79e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mal6g4089 Homeodomain 1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4089 - - lang:109335690 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3243 3 108328630 108331682 Mal6g4089 6 116761350 116764175 PCT