Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4079 ATGCAGAAGGATTCATGGACTCCTGAAGAAGACATGATACTGATAAAAACTCATTGGAAAGTTGGGAACAAATGGGCAGAAATTTCAAAGAGATTGTCCGGTAGGAGTGAGAACTCCATCAAGAATCGTTGGAACTCCACCAAGCGACGCCAAAACGTCAGGATGAAGAGGAAATGTAACCATCATAGCAATGATGGATCATTGCTTTATGAATACATAAAATTGGTTACCTTAGCTGAAAAAACTGCAAAAGATTCAAAGATGAACACAAGTGAGATGAAGATGAAGATGTTGGGTGATGGTAATGAAGATCTCGCTCGTTTGCTGTTATAA 333 0.3904 MQKDSWTPEEDMILIKTHWKVGNKWAEISKRLSGRSENSIKNRWNSTKRRQNVRMKRKCNHHSNDGSLLYEYIKLVTLAEKTAKDSKMNTSEMKMKMLGDGNEDLARLLL* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4079 110 SUPERFAMILY Homeodomain-like 3 55 IPR009057 -
Mal6g4079 110 SMART sant 2 50 IPR001005 -
Mal6g4079 110 CDD SANT 5 48 IPR001005 -
Mal6g4079 110 Gene3D - 4 58 - -
Mal6g4079 110 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 52 IPR017930 -
Mal6g4079 110 Pfam Myb-like DNA-binding domain 3 46 IPR001005 -
Mal6g4079 110 PANTHER TRANSCRIPTION FACTOR MYB98 3 83 - -
Mal6g4079 110 MobiDBLite consensus disorder prediction 36 60 - -
Mal6g4079 110 ProSiteProfiles Myb-like domain profile. 1 48 IPR001005 -
Mal6g4079 110 PANTHER MYB PROTEIN-RELATED 3 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4079 Mal-Chr6 116383364 116383696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4079 1 79 MYB Transcription Factor Family AT4G18770 54.430 3.57e-22 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal6g4079 Myb_DNA-binding 2e-14 CL0123