Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4071 ATGGTGTATTGTGATCACTGTTTGAAAAACGTTAAGGGAATACAAGAAGACGAGGGTCAAGTGTGTTGTGAGATTTGTGGGAAGGTGTTGGAAGAATGCTTTTTGTCTAATGAGCCAACTTTTCAGAAAAACGCTGGTGGACAGAGCAAATTATCAGGCAATTTGATAAGGGGGGCTCTTGAAATCTCTGAATCCCGTCAAAGGACCATAGATAGAGCTACAGATAATATTAGAAATCTAAGTCGCAACCTTGGAGTGGATGATTATAGTATAGCTGATGAAGCTATTATCTTTTACAAAATAGGACTTGATAAAAACTTTACCAAGGGACGTAGATCAGAACTTGTACAAGCTGCTTGTCTCTATCTTGCATTCCGGGATAAAGATAAGCCATACCTTCTTATTGATTTTTCAAATTCTTTAAGGACAAATGTTTATGCGCTTGGCGCAGTTTTTTTGCAGCTTTTGAAAGTGTTAAGGCTTGAAAATCACTCGATTGTTCGAAAGCTTGTTGATCCCAGCATCTTTATTCACAAATTTACGAATAATTTGTTAAAGCAAAGTAATGCGGCTGTCTCTCAATCTGCACTGAATATTATTGCCGACATGAAACGTAACTGGATGACGACAGGGAGAAAGCCTGGCGGATTATGCGGTGCAGCGTTATACATGGCTGCTCTTGCACATGGTTTTAAATGCTCGAAGACAGACGTTCTAAAAGTCGTTCATGTATGTGAAGCAACATTGACCAAGCGGCTGATAGAGTTTGAGAATACAGATTCTGCCAGCTTGACAATTGATGAGTTGAACGCAATGGCAAAAGAGCATGAAAACAGTCCAATTATTTTACCGCGTGTGAAAAGTCCAATTAAAATACCAAATGGTGAACTGAACAGATGTACTTCAGAGGAGGAGGAGGAGGGTGAGAAGAAAAAGGGTGAGGAGGATCCCCTAATGTGTGAACACAAGGGTAGTGAACCTAAAATACCCCTTTTTGCACTTGGATTGTGTGAAACATGTTACAGATTTTTTGATAAACTCTCTGGTGGACTTGGTGGTGGTTTGGATCCTCCTGCATTCCAGCGTGCTGAGAGGGATAGAATGGCAAAGTCAAATTCTGAGGAGAATGCTAATAAATCAGATGATTTGGCAAAGGATTTAAATGATGCAGACGAGATCCAAATGGAGTTACATGCCTCTGAGCCTGAAATTATTGGGGGTGATGTAGAATATGTGGCCACTAAAGATGGTGAGCATGATAAGTCACATATTGAAGATGATATGAATGCAAAAACTCATGATGAATCAGAAAGCCTCTCTGATATTGATGATAAGGAGGTTGATGGTTACCTTCACAATGAGGAGGAAGCGCGTTACAAGAAGAAGATATGGGAATTTAATAATCGAGAGTATCTTGAGGAACAAGCTGTCAAGGAAGCAGCTGCAGAAGCTGAAAGAAAAAGAATAGAGGCGGAATTTGCAAATTGTTCTCCTGAAACGCGTGCAGCAAAACACCTTCTTGCATCTGTTCATGAAGATTTGGCAAAATCCAGAAAGGAAAAGAGGAAACAACGAGCTGAAGAGGAAAAAAGGTTGGGTCCTGCTCAATCTGCTGTAGAGGCAACTAGCCGAATGTTGAAAACAAAGAGGCTCAGCTCCAAAGTCAATTTAGATCGCTTGGATAAATTATTTGATAAACCTGCAGCTCCAGAGAATCAAAAGAAAGTACGATTTGAAGAAACAAAGGAGGATGAATCGGGACCAGTCGATGAATTTCCGGATGATGATGAAGATTATATGGGTGGAGAATATGATAATACTATGTATCCAGAAAATGAATATGAGACATTTGACTATGAGGAAGCTGGTGATTATTATGGCTATTGA 1887 0.399 MVYCDHCLKNVKGIQEDEGQVCCEICGKVLEECFLSNEPTFQKNAGGQSKLSGNLIRGALEISESRQRTIDRATDNIRNLSRNLGVDDYSIADEAIIFYKIGLDKNFTKGRRSELVQAACLYLAFRDKDKPYLLIDFSNSLRTNVYALGAVFLQLLKVLRLENHSIVRKLVDPSIFIHKFTNNLLKQSNAAVSQSALNIIADMKRNWMTTGRKPGGLCGAALYMAALAHGFKCSKTDVLKVVHVCEATLTKRLIEFENTDSASLTIDELNAMAKEHENSPIILPRVKSPIKIPNGELNRCTSEEEEEGEKKKGEEDPLMCEHKGSEPKIPLFALGLCETCYRFFDKLSGGLGGGLDPPAFQRAERDRMAKSNSEENANKSDDLAKDLNDADEIQMELHASEPEIIGGDVEYVATKDGEHDKSHIEDDMNAKTHDESESLSDIDDKEVDGYLHNEEEARYKKKIWEFNNREYLEEQAVKEAAAEAERKRIEAEFANCSPETRAAKHLLASVHEDLAKSRKEKRKQRAEEEKRLGPAQSAVEATSRMLKTKRLSSKVNLDRLDKLFDKPAAPENQKKVRFEETKEDESGPVDEFPDDDEDYMGGEYDNTMYPENEYETFDYEEAGDYYGY* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4071 628 MobiDBLite consensus disorder prediction 419 448 - -
Mal6g4071 628 PANTHER TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT 1 568 IPR029529 GO:0000126|GO:0000995|GO:0006383
Mal6g4071 628 CDD CYCLIN 172 247 IPR013763 -
Mal6g4071 628 Gene3D Single helix bin 431 483 - -
Mal6g4071 628 Coils Coil 472 492 - -
Mal6g4071 628 MobiDBLite consensus disorder prediction 585 602 - -
Mal6g4071 628 SUPERFAMILY Cyclin-like 73 162 IPR036915 -
Mal6g4071 628 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 568 IPR000812 GO:0006352|GO:0070897
Mal6g4071 628 MobiDBLite consensus disorder prediction 507 534 - -
Mal6g4071 628 PRINTS Transcription initiation factor IIB signature 16 36 IPR000812 GO:0006352|GO:0070897
Mal6g4071 628 PRINTS Transcription initiation factor IIB signature 212 228 IPR000812 GO:0006352|GO:0070897
Mal6g4071 628 PRINTS Transcription initiation factor IIB signature 118 137 IPR000812 GO:0006352|GO:0070897
Mal6g4071 628 Coils Coil 507 531 - -
Mal6g4071 628 SMART cyclin_7 175 258 IPR013763 -
Mal6g4071 628 SMART cyclin_7 75 157 IPR013763 -
Mal6g4071 628 MobiDBLite consensus disorder prediction 507 544 - -
Mal6g4071 628 MobiDBLite consensus disorder prediction 565 584 - -
Mal6g4071 628 Pfam Brf1-like TBP-binding domain 440 565 IPR011665 -
Mal6g4071 628 MobiDBLite consensus disorder prediction 565 611 - -
Mal6g4071 628 SUPERFAMILY Cyclin-like 170 264 IPR036915 -
Mal6g4071 628 CDD CYCLIN 77 139 IPR013763 -
Mal6g4071 628 Gene3D - 172 263 - -
Mal6g4071 628 MobiDBLite consensus disorder prediction 298 321 - -
Mal6g4071 628 MobiDBLite consensus disorder prediction 297 321 - -
Mal6g4071 628 Pfam Transcription factor TFIIB repeat 68 157 IPR013150 GO:0017025
Mal6g4071 628 Pfam Transcription factor TFIIB repeat 168 258 IPR013150 GO:0017025
Mal6g4071 628 Gene3D - 62 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4071 Mal-Chr6 116230112 116244834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4071 1 549 Inorganic Solute Cotransporters AT2G01280 41.007 1.71e-106 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4071 K15196 - gmx:100817609 610.527