Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4060 ATGTTGCTTCGAATTGACACCAATTGGTTTGTTCCACTTACATATGCCGCATTTCCACATAATAAGACTGAGGATGGTCGTTTTCTGGTGAACAGCGTCCCCACTTTCACAAAGTATTGTCAATTTGGGATTCATCATTCTTATTATTATTATTATTATTATGGTCATAAAAGAACTACAAGTTCATATTGTCGTTCGGGGATGAAGGACACAGTAGTAGTCTCTCAATGGGAACTGCAGGAAGGTCGTATCGCGGTTTCAACTTTTCTTCAACAAATGGGTGTGTCCGTGGAGGAATCCCAATCAATCGCATCAAAATCCCCAGCATATCTCAACATGTTGGTAGAAAGTGTTAGGGATTTGGACCAGTTCTCTTCTTCCATGTTGGATGCTAATGCTAATGGTGTGTTCAACTTGAATTTCAACTACAGGGACAAGATTCTTCACATTGCTTCTCTCAAAGGTGACAACGGCAAACTAGCCTACTTAGAGAGTCTCGGTTTCACACTCTCTTCCTCTATGAATGTCGCCAGGTATATATCCTCCGCTCACACCCTCCCATCTCTCATAAACAAGGTCACGTCTATCAAACAACTCCTCTTTCTTCCCACTCACACTACTCCTTACTATCAACTCCTTATCAAGAATATTCGCCTCATCATCACCCACTTATCGATTTCATTAGACGAAGATATGCAACACACTTTCTCCTTTTTCGAAAAGGTTCAAGCAAGGCGTGGAGGTCTAAATATTCTCGCGTCTCAAGATGCTGCTTTCCTCTGCTTCATTGAATCATTTCCCCGTGTACTTTTGTTATCACTAAATAATCACATCTCACCTTTACTGGATATTCTCCAAAATACTGGGATCCCTACAGATCGCATCCCCAACATAATATTGGCTTTTCCTCCTATTCTGCTCTGGAATGTTCAACTCCTTCAAACTAGAGTTCTGGCCTTGAACCAGATTGATGGTGTGGATAAAGATTATGCCAAGTTGATGCTAAAATATCCGTGGGTTCTATCTACAAGCATTCAAGAGAACTATAAGGAGGTCTTTGCCTTTTTATATTCCGTGAAGGTTCCAAAGACATGGATAGACCATGCAATCAAAAGACAACCTCAACTATTGGGTTGTTCAACTAGCAAGCTGAAGTTGATGGTAGATCAGTTTGCTGAATTAGGAGTTCAAAGGAAAAAGTTGTATCAGGTTATCACTAGAAGTCCTCAGCTATTATTACAGAAGCCTGAAGACTTTCGACAGGTTGTTCTGTTCTTTGAAAATATAGGTTTTGATAAAGAAAATATTGGGAGAGTACTTGCTCGCTGCCCTGAAATTTTTGCCACCAGCATTAGTAAAACTTTACAGAGCAAGATTGAGTTCCTTAGTAGAATTGGTGTTTCTAAAGCTAACATTCCTGTGGTTATCAGAAAGTATCCAGAACTACTTGTGTCTGACATTGAGAAAACCTTACCTCAACGGATAGTGTACTTGATGAAGCTAGGACTTTCAAAGAAGGAAATTGCATTTATGGTACGCACATTTTCTCCTCTACTTGGGTACAGCATAAAGGAGGTTCTGATGCCAAAAATAGAATTTCTGGTGAACTCAATGAAGAGGCCAGTAAGAGATGTGGTGAGCTACCCTAGGTATTTTAGCTATTCGCTAGAAAAGAAGATAAAGCCAAGATATTGGGTTCTGAAAAGAAGGAATATCGAATGTAGCTTAAAGGATATGCTGGGAAAAAATGATGAGGAATTTGCTGCTGAATTTATGGGTGTTGGAAGGATGCTCGTCGGTCCTCCTCTGTCTTCTCATGATAGGCTGTAA 1830 0.4011 MLLRIDTNWFVPLTYAAFPHNKTEDGRFLVNSVPTFTKYCQFGIHHSYYYYYYYGHKRTTSSYCRSGMKDTVVVSQWELQEGRIAVSTFLQQMGVSVEESQSIASKSPAYLNMLVESVRDLDQFSSSMLDANANGVFNLNFNYRDKILHIASLKGDNGKLAYLESLGFTLSSSMNVARYISSAHTLPSLINKVTSIKQLLFLPTHTTPYYQLLIKNIRLIITHLSISLDEDMQHTFSFFEKVQARRGGLNILASQDAAFLCFIESFPRVLLLSLNNHISPLLDILQNTGIPTDRIPNIILAFPPILLWNVQLLQTRVLALNQIDGVDKDYAKLMLKYPWVLSTSIQENYKEVFAFLYSVKVPKTWIDHAIKRQPQLLGCSTSKLKLMVDQFAELGVQRKKLYQVITRSPQLLLQKPEDFRQVVLFFENIGFDKENIGRVLARCPEIFATSISKTLQSKIEFLSRIGVSKANIPVVIRKYPELLVSDIEKTLPQRIVYLMKLGLSKKEIAFMVRTFSPLLGYSIKEVLMPKIEFLVNSMKRPVRDVVSYPRYFSYSLEKKIKPRYWVLKRRNIECSLKDMLGKNDEEFAAEFMGVGRMLVGPPLSSHDRL* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4060 609 PANTHER CGI-12 PROTEIN-RELATED 70 599 IPR003690 GO:0003690|GO:0006355
Mal6g4060 609 SMART mt_12 509 541 IPR003690 GO:0003690|GO:0006355
Mal6g4060 609 SMART mt_12 331 362 IPR003690 GO:0003690|GO:0006355
Mal6g4060 609 SMART mt_12 367 397 IPR003690 GO:0003690|GO:0006355
Mal6g4060 609 SMART mt_12 473 504 IPR003690 GO:0003690|GO:0006355
Mal6g4060 609 SMART mt_12 402 432 IPR003690 GO:0003690|GO:0006355
Mal6g4060 609 SMART mt_12 260 291 IPR003690 GO:0003690|GO:0006355
Mal6g4060 609 SMART mt_12 542 573 IPR003690 GO:0003690|GO:0006355
Mal6g4060 609 SMART mt_12 437 468 IPR003690 GO:0003690|GO:0006355
Mal6g4060 609 Pfam mTERF 282 588 IPR003690 GO:0003690|GO:0006355
Mal6g4060 609 Gene3D Transcription termination factor 3, mitochondrial 387 595 IPR038538 -
Mal6g4060 609 PANTHER TRANSCRIPTION TERMINATION FACTOR 4, MITOCHONDRIAL 70 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4060 Mal-Chr6 116073721 116087290 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal6g4060 mTERF 3e-94 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4060 K15032 - gmx:100802127 737.258