Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4030 ATGGTGAAACCAATAATATCTCTAACCCACCATCTCCATTTCTTAACAACAACTTCATACAGACTCTTCCATCCATTCTCCACTCTCCGTTTCCTCTCCACATCACCATACCCTCTCCAATACGAACTCATCATCAGCCGCCCCAATCTCCCCAAACCCACCCGAACCAAACCCCTTAACTCCCCCGAACCAACCCCACCCCAAAACAACTCCCTCCAATCCTGGGCCAACGATAAATTAACTTCTGAACCGGAATCAAACCGACCCGGTTCATCAAAATCCCAACTTGATGATAATCTTGATAAATCCAAGAGAAAATACTACAACAAACGAAGGAAGAGAATGTATGGGTCTGATTCCGACGATGACAATCGTCGGAACGAGGAACAGTTTGTGGAGATGATACCTGAAGTGGTGGAATTAAGAACTTTGCATAAGAGGGAAGAAGAATTGTATATGTATGATGCTTTTTGTTATCCTTGGGAGAAAGATAAACATTATAAAATGGTTTATCAATTGGAGAAAAAGTATTTTCCTAATCAGTGTTTGGATCAGGCTTTTTTGAAACCTGGTCAATCCAATTGTTCAAATACACATTCTAATTCAAATTCGAATGCAAATGCAATTTCGAATGCGAATGGTAGGGTTAGGAATAAGAAAGTTGGTGTTTTTGGTGTTGGGGAGAATAAGGATGAGGTTGGTGGTGGTGGTGTTGATGATAAGTTGGTGTTTTTTGAGGAGAATGAGAAAGGGGTGGAAAAGGAGAAGGGAAAGGAAAAGAGGGGTGTGGATAGTAAAGATGTTAAGGAGAAGAAAGTTGAGGAGTTTTTTAAGGGTTTGAATGTGAAGAAGGAGGTTGAAGTTGTTGAGCCGTTTTTTAGTTCAAGGAGGACGGGGCTTCCTCCCGTTTGGGATAGTTCGCATGGGACTGTGCTTTTGATTAACAAACCTAAAGGTTGGACTTCATTCACAGTTTGTGGAAAGCTTCGCCGCCTTGTCAAAGTGAAAAAGGTAGGACATGCCGGAACTCTTGATCCAATGGCTACTGGTTTATTGATTGTGTGCGTTGGCAAATCAACAAAACTGGTAGATAGATATCAAGGGATGGTTAAGGGTTATAGTGGTGTTTTCCGCTTAGGGGAGGCTACTTCAACATGGGATGCTGATTCACCAGCCAGCTTAATATGTAGGTCATTCAGCGTGAGCCATGGGAGCACATCAAAGACGAGGATATAA 1236 0.4215 MVKPIISLTHHLHFLTTTSYRLFHPFSTLRFLSTSPYPLQYELIISRPNLPKPTRTKPLNSPEPTPPQNNSLQSWANDKLTSEPESNRPGSSKSQLDDNLDKSKRKYYNKRRKRMYGSDSDDDNRRNEEQFVEMIPEVVELRTLHKREEELYMYDAFCYPWEKDKHYKMVYQLEKKYFPNQCLDQAFLKPGQSNCSNTHSNSNSNANAISNANGRVRNKKVGVFGVGENKDEVGGGGVDDKLVFFEENEKGVEKEKGKEKRGVDSKDVKEKKVEEFFKGLNVKKEVEVVEPFFSSRRTGLPPVWDSSHGTVLLINKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKSTKLVDRYQGMVKGYSGVFRLGEATSTWDADSPASLICRSFSVSHGSTSKTRI* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4030 411 MobiDBLite consensus disorder prediction 113 127 - -
Mal6g4030 411 MobiDBLite consensus disorder prediction 48 127 - -
Mal6g4030 411 MobiDBLite consensus disorder prediction 66 94 - -
Mal6g4030 411 PANTHER TRNA-PSEUDOURIDINE SYNTHASE 283 392 IPR014780 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Mal6g4030 411 Gene3D Pseudouridine synthase 305 405 - -
Mal6g4030 411 Pfam TruB family pseudouridylate synthase (N terminal domain) 330 390 IPR002501 GO:0006396
Mal6g4030 411 SUPERFAMILY Pseudouridine synthase 297 394 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4030 311 383 NAC Transcription Factor Family AT3G57150 43.836 6.33e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4030 K03177 - gmx:100793939 385.185