Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4013 ATGGAGTCACCTATGACTGCAGTTGAAGCTAGGTCAGAGGTTCAGAATTCAGTTTCTGGGGTACCGATACGCCACAGCCTTCCTATAACATCAGGGATTCCCCGTCCTTCGCGGCCTCCCTTATATAGAAATAATCACGGAGCTTCGTCTTCTTCCACATCCTTTTTGGAACAAAGACATTATCATCATAATTATGGAACAAAGAAGATTCACCATCTGAACAGCTATGTGATTAATCAAAAGCATTCATATCACGACAGAAACAATGAAAGGTTGCCAACAAAATTATGCAGCAAGCAACTGTTTGATGATGATTCAAAGAATTGTAACTCAAGTTCTGCAGTATTAGAATCCGTCGATTGTCTCTTAGTTCCATCTAAACGAGCTGTTGTTAATCAACCGAAGAATTACTATTGTCAGTCAGAGAATAGTTTTTGTCTTAGTCCTCTGAATAGTTTCTATTCAGGCACTGTCTATTCGGAAGCAAAACAAAGTTTCACTAATACTGAAGTCAGTGAGTGTGTTAGTGTTGATGATAAGTCGTTCGAAAGCGGAGAATTTTCAAATTCATATGATTTTATCGGGAGTAGGAAAACCAGCATCTGTAGAGCGAGTACCGGAAGTGATGTTACTGACGAAAGCAACACGAGTAGTTTGCGTAGTGCTTTGTATAAACCTCATAAGGCAAATGATATAAGATGGGAAGCGATTCAAGCTATCCGAGATCGCGACGGGATGTTGGAAATGAGGCATTTTAGAATGTTGAGGAATTTGGGAAGTGGAGATATAGGAAGTGTATATCTAGCTGAACTGAGTGGCACAAGGACTTCTTTTGCTATGAAATTCATGAACAAAACCGAGCTTGCAAGTCGTAAGAAGTTAATGAGGGCTCAGACGGAAAGAGAGATATTGCAGTCTTTAGATCATCCTTTTTTACCGACATTATATACACACTTTGAGACAGAGACATTCTCTTGCTTGGTAATGGAGTTTTGTCCCGGTGGCGACCTTCATTCAATCAGGCAGAGGCAGCCTGGGAAGTATTTTTCGGAGCACGCTGTCAGGTTTTATGTTGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAATAATCTATAGAGACCTTAAACCCGAGAATGTGTTGGTGAGAGAAGACGGTCATATAATGCTTTCAGATTTTGATCTCTCTCTAAGGTGCACTGTCAGTCCAACTCTAGTGAAGTCATCAAACCCGATCACCGAAACAAAAAGCTCCCGATACTGCATTCAGCCTTCCTGCATTCAGCCAACATGTGCAATGCAGCCAGACTGCATCCAACCTGCATGCTTTTCGCCACGGTTTCTATCTGGAAATTCTAAAGAGAAAAAATTCAGACCAAGGAATGACATGCATCACCCAGGGACACCTCTACCTGAGCTAGTCGCCGAGCCAACAAGCGCGCGATCGATGTCCTTTGTAGGCACACACGAGTACTTGGCGCCTGAAATTATTAAAGGTGAAGGACACGGAAGTGCTGTGGATTGGTGGACGTTTGGGATATTCATATATGAACTCTTGTTTGGTCGAACACCGTTCAAAGGTTCTGTGAATCGAACCACAATGTTTAATGTTGTTGGGCAGCCTTTAAGGTTTCCAGAATCTCCTACTGTCAGCTTCGCAGCAAGGGACTTGATAAGAGGTTTACTTGTAAAAGAGCCTCAACACCGTCTTGCCTATAGACGCGGAGCTACCGAAATCAAACAACATCCTTTCTTTCACAATGTGAACTGGGCGCTTATCCGTTGCGCTAATCCGCCGGAGGTACCAAGAGAGACCATGATGATGAAACCAAACTCAACTGAAAATGAAGTTGGAATGAACCCTTCTGGTAATTATTTAGATGTTGATTTCTTTTGA 1905 0.4247 MESPMTAVEARSEVQNSVSGVPIRHSLPITSGIPRPSRPPLYRNNHGASSSSTSFLEQRHYHHNYGTKKIHHLNSYVINQKHSYHDRNNERLPTKLCSKQLFDDDSKNCNSSSAVLESVDCLLVPSKRAVVNQPKNYYCQSENSFCLSPLNSFYSGTVYSEAKQSFTNTEVSECVSVDDKSFESGEFSNSYDFIGSRKTSICRASTGSDVTDESNTSSLRSALYKPHKANDIRWEAIQAIRDRDGMLEMRHFRMLRNLGSGDIGSVYLAELSGTRTSFAMKFMNKTELASRKKLMRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHSIRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSSNPITETKSSRYCIQPSCIQPTCAMQPDCIQPACFSPRFLSGNSKEKKFRPRNDMHHPGTPLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFIYELLFGRTPFKGSVNRTTMFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRETMMMKPNSTENEVGMNPSGNYLDVDFF* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4013 634 MobiDBLite consensus disorder prediction 457 477 - -
Mal6g4013 634 SUPERFAMILY Protein kinase-like (PK-like) 232 609 IPR011009 -
Mal6g4013 634 Pfam Protein kinase domain 485 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g4013 634 Pfam Protein kinase domain 253 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g4013 634 Gene3D Transferase(Phosphotransferase) domain 1 336 405 - -
Mal6g4013 634 ProSiteProfiles Protein kinase domain profile. 252 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g4013 634 Gene3D Transferase(Phosphotransferase) domain 1 483 606 - -
Mal6g4013 634 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 98 634 - -
Mal6g4013 634 PANTHER FLIPPASE KINASE 1-RELATED 98 634 - -
Mal6g4013 634 CDD STKc_phototropin_like 250 606 - -
Mal6g4013 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 373 385 IPR008271 GO:0004672|GO:0006468
Mal6g4013 634 Gene3D Phosphorylase Kinase; domain 1 250 335 - -
Mal6g4013 634 SMART serkin_6 252 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4013 Mal-Chr6 115455957 115458308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4013 159 634 AGC Kinase Gene Family AT5G47750 68.219 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mal6g4013 Pkinase 1.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4013 K08286 - gmx:100810909 980.704