Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g4010 ATGGAGAAAGAGATTGTGGAAAACCTTTGGAATGGTGATAGTGATACTCAAATTCAAGCAACAATGAAACTTAGTAGATTGTGCAATAAGCAAAAGCACAATTTGGCAGAAAGTGGAGTTATGGTTCCTCTTGTTTCAATGCTTCATTCTGAAAATTGTGAAGCCATAGAAGCTTCTCTTTGTGCTTTTCTCAGCCTCTCCTTTGGTAGTGAAAGAAACAAGATTCGAATTGTAAGGTATGGAGTTTTGCCAATTTTGCTGAACCTCCTCCATTGTGAAAGTCAGACAGTGATACAATTGTCGGTAGCAGCCATGTTAACGCTTTCTTCTTGCAAAAGAAATAAGGTAGCAATAGCTTCATCCGGTGCAGTTCAAATTTTGGTTGAATTTATCAATAATAGTAACACTGAAACTCAGTCTCAACTAGACGCTATAGCTACTCTACACAACCTCACAACCTGCCAAGAGATTATTCCATTGATTGCATCTTCTGGTGTTATATTCTCCTTGCTTCAACTTATCCACGACTCGGTAAAATCATCTCCACTGGTTGAGAAAGCAATAGGATTGCTAGAAAATATTGTTTCTTCATCAGAGAGTGCACTTTGTGAGGCTGCTAGTACCGGAGGAGCAATTCGGATACTGGTTGAAACTATTGAAGATGGATCTTCACTAGGAAAAGAGCATGCAGTTGAGAAAAATAGAGTATTGATTTTGACAGATGGGGTGATGCCAGGATTGCTTCAGTTAAGCGTCGATGGAACATGGAGAGCAAAATCCACGGCTAGAGAATTGTTGTTGCTTCTGAGAGACTGCTCTAGTTATAGCTCAGGACGTACACAAATTAACCATGAGCTTATAGAACAGATAATGGAAGAAATTGATGCAGAAGGAGAGAAACTGACAGATACTACTTTGAGATTGGTAGAGGAGATGATTGCAAAGCTCAATACATAA 957 0.3918 MEKEIVENLWNGDSDTQIQATMKLSRLCNKQKHNLAESGVMVPLVSMLHSENCEAIEASLCAFLSLSFGSERNKIRIVRYGVLPILLNLLHCESQTVIQLSVAAMLTLSSCKRNKVAIASSGAVQILVEFINNSNTETQSQLDAIATLHNLTTCQEIIPLIASSGVIFSLLQLIHDSVKSSPLVEKAIGLLENIVSSSESALCEAASTGGAIRILVETIEDGSSLGKEHAVEKNRVLILTDGVMPGLLQLSVDGTWRAKSTARELLLLLRDCSSYSSGRTQINHELIEQIMEEIDAEGEKLTDTTLRLVEEMIAKLNT* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g4010 318 Gene3D - 3 312 IPR011989 -
Mal6g4010 318 Coils Coil 309 318 - -
Mal6g4010 318 Pfam Kinesin-associated protein (KAP) 23 165 - -
Mal6g4010 318 PANTHER U BOX DOMAIN-CONTAINING 1 298 - -
Mal6g4010 318 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
Mal6g4010 318 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 298 - -
Mal6g4010 318 SMART arm_5 111 153 IPR000225 GO:0005515
Mal6g4010 318 SMART arm_5 154 196 IPR000225 GO:0005515
Mal6g4010 318 SMART arm_5 28 68 IPR000225 GO:0005515
Mal6g4010 318 SMART arm_5 70 110 IPR000225 GO:0005515
Mal6g4010 318 SUPERFAMILY ARM repeat 4 299 IPR016024 -
Mal6g4010 318 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 165 209 IPR000225 GO:0005515
Mal6g4010 318 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 122 166 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g4010 Mal-Chr6 115442244 115443714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g4010 3 279 U-box Gene Family AT2G23140 32.423 2.17e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g4010 - - gmx:100778534 469.929