Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3992 ATGGCCTCAAGCTATTCAAATTCTCCATGTGCTGCTTGCAAGTTTCTAAGAAGAAAATGCAACCAAGATTGCATATTTGCACCTTATTTCCCACCAGAAGAGCCTCATAAATTTGTCAATGTTCACAAAATATTTGGTGCAAGCAATGTTAGCAAAATTCTAAGTGAAGTTTTACCTCATCAAAGAGAGGATACAGTGAATTCTCTAGCTTATGAAGCTGAAGCAAGGATTAAAAATCCAGTGTATGGTTGTGTTGGAGCTATATCAGTGCTCCAAGGACAACTTCTTAGGCTCCAGAAGGAACTTGATGCTACAAATGCTGATTTGATTCGCATTACTCATGAATGTTCTTCTTCTATGGGTCTTGGAGATGCTCACTCTCATGGCTTTTTAAATTACCCTTCTAATTTGAGCAATGATATGTGA 426 0.3779 MASSYSNSPCAACKFLRRKCNQDCIFAPYFPPEEPHKFVNVHKIFGASNVSKILSEVLPHQREDTVNSLAYEAEARIKNPVYGCVGAISVLQGQLLRLQKELDATNADLIRITHECSSSMGLGDAHSHGFLNYPSNLSNDM* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3992 141 ProSiteProfiles LOB domain profile. 8 109 IPR004883 -
Mal6g3992 141 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25 2 115 - -
Mal6g3992 141 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 115 - -
Mal6g3992 141 Pfam Lateral organ boundaries (LOB) domain 9 105 IPR004883 -
Mal6g3992 141 Coils Coil 88 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3992 Mal-Chr6 115107073 115107498 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3992 3 121 AS2 family AT3G27650 75.610 2.01e-66 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal6g3992 LOB 1.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3992 - - gmx:100788656 218.394