Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3972 ATGTCTCCTTATTTTCTCTCTTCAAACCTCAAAATGCATAATCTCTATGTCTCACCTTCTTCTTCTTCAACCCTGCAAATTTCAAACCACATAGCCACACCAAAGTTTCAGTTTCCTCATTCTCATTCTTTTTCTTCTTCACCACTTAGACTCACCATTGATGGATTTTCATGTCCATCTTCTTCTTTCTTCCAAACTGTTAGAAAATCTTCATCTTTTCTCATTTCAAATCCAAAAATGGATTCTTTTAGAGTCTTTGCTGCTTCTTCTCTTCCAGAGGCACAGAGTGATGAAGGGAAACAAACTTCTGGTTTTGTTCAATCTCTTCAACTTGGTTTCATGTTTGCTACTTGGTATCTCTTGAATATTTACTTCAACATTTACAACAAACAGGTTCTAAAAGTCTATCCATTTCCAGCAACAGTTACAGCATTTCAATTTGGCTTTGCTTCGTTGGTGATCAATTTGATCTGGACTTTGAATCTTCATCCCAGACCAAAAATTAGTAGATCACAGCTTACAGCAATCCTTCCACTTGCTGTGGTTCATACATTGGGGAACCTGTTGACCAACATTAGTCTTGGCAAGGTTGCTGTTTCTTTTACTCACACCATCAAATCTATGGAACCTTTCTTCACTGTTGTTCTTTCATCCCTTCTCCTCAGTGAGATGCCAACTTTTTGGGTGGTTTCATCTCTTCTACCTATAGTTGGGGGAGTGGCATTGGCATCAATGACTGAAGTCTCTTTCAATTGGATTGGATTCGGCACTGCAATGGCATCTAACCTTATGAATCAATCGCGGAATGTTTTGAGCAAAAAACTAATGACTAACGAAGAGGAAGCTTTGGACAATATCAATCTCTATTCAGTTATAACCATCATTTCCTTTTTCTTATTGGCACCATTTGCTATATTTTTGGAGGGTGTCAAGTTTACTCCTTCATATCTGCAATCTGCGGCAAGCCAAGGATTGAATGTTAGAGAGCTATGTATAAGATCAGTTTTTGCTGCATTCTGCTTCCACGCATACCAGCAGGTTTCATATGGGATATTAGAGAAGGTTTCACCTGTGACACACTCAGTCGGAAACTGCGTGAAACGTGTGGTTGTCATCGTCTCTTCGGTTATCTTCTTCCAAACTCCTGTCTCACCTATTAATGCACTTGGAACTGCAATTGCACTTGTTGGTGTTTTCTTGTATTCAAGGGCAAAGAGGATTAAGCCAATGCCAAAAACAAAGGAAGCATAA 1251 0.3909 MSPYFLSSNLKMHNLYVSPSSSSTLQISNHIATPKFQFPHSHSFSSSPLRLTIDGFSCPSSSFFQTVRKSSSFLISNPKMDSFRVFAASSLPEAQSDEGKQTSGFVQSLQLGFMFATWYLLNIYFNIYNKQVLKVYPFPATVTAFQFGFASLVINLIWTLNLHPRPKISRSQLTAILPLAVVHTLGNLLTNISLGKVAVSFTHTIKSMEPFFTVVLSSLLLSEMPTFWVVSSLLPIVGGVALASMTEVSFNWIGFGTAMASNLMNQSRNVLSKKLMTNEEEALDNINLYSVITIISFFLLAPFAIFLEGVKFTPSYLQSAASQGLNVRELCIRSVFAAFCFHAYQQVSYGILEKVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINALGTAIALVGVFLYSRAKRIKPMPKTKEA* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3972 416 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 47 409 - -
Mal6g3972 416 PANTHER SOLUTE CARRIER FAMILY 35 47 409 - -
Mal6g3972 416 SUPERFAMILY Multidrug resistance efflux transporter EmrE 151 246 - -
Mal6g3972 416 SUPERFAMILY Multidrug resistance efflux transporter EmrE 295 406 - -
Mal6g3972 416 Pfam Triose-phosphate Transporter family 109 402 IPR004853 -
Mal6g3972 416 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 109 412 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3972 Mal-Chr6 114881580 114886685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3972 13 413 Antiporters AT5G33320 58.809 1.30e-150 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3972 K15283 - gmx:100819280 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3972 6 114881580 114886685 Mal6g3972 6 114881580 114886685 ECH