Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3952 ATGGAGCGTATTTCAGAAAAACGATATCCTCTCAGTGCAAAAGATTACAAGTTATATGAAGAGGTTGGGGAAGGCGTTAGTGCCTCGGTATACCGGGCTCTCTGCATTCCACTCAATGAGATTGTTGCCATCAAAGTTCTTGATCTTGAGAAGTGCAATAACGATTTGGATGGAATTCGGAGAGAGGTACAGACCATGAGCTTGATTGATCATCCAAATCTTTTACGGGCACATTGCTCTTTTACTGCTGGGCACAGTCTTTGGGTTGTGATGCCATTCATGTCCGGGGGCTCTTGCCTTCATATAATGAAATCTTCCTTTCCTGAGGGTTTTGATGAGCCTGTTATTGCAACTGTATTGCGTGAGGTTCTCAAAGCTCTTGTTTATCTCCATGCCCATGGGCACATACATAGAGATGTTAAGGCTGGGAATATTTTGCTTGATTCTAATGGTTCAGTCAAAATGGCTGACTTTGGAGTGTCTGCGTGTATGTTTGATACTGGAGATAGGCAACGGTCAAGAAATACTTTTGTTGGAACACCTTGCTGGATGGCTCCCGAAGTTATGCAACAATTGCATGGATATGATTTTAAAGCAGATATATGGTCATTTGGTATAACAGCACTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCACCGATGAAAGTTTTGCTTATGACTTTGCAGAATGCCCCTCCAGGTCTTGATTATGAAAGAGACAAGAGATTTTCAAAGTCTTTCAAAGAGTTAGTTGCCACCTGCTTAGTCAAAGACCCAAAGAAGCGTCCAAGTTCAGAAAAGCTTTTAAAGCACCACTTCTTTAAACATGCACGTGCCACCGAATATCTATCCCGCACCATTCTCGATGGTCTTGCTCCACTAGGAGATCGTTTTAGAATGCTAAAGGCTAAAGAGGCAGATTTATTGATGCAGAACAAGGCTCTTTATGAGGATATGGAGCAATTATCTCAGAAAGAATATATTCGAGGAATTAGTGCATGGAATTTTAACCTGGAAGATTTAAAAAGTCAAGCTGCTCTTATCCAAGATGCAGACATGTCAAATGCAGAAGAGCCAGATACGGATAAGAGGAATAAAGACATATCAAATGACTTAAAGGTTTCAGCGGAGGATCCATCTGCTTCTAATCATTCAGATGGTGCATCCACATTGGACAAGGAGGATGGATTCAACAATATTCAGGATTTGGAAAGTTCACTTGCTTCATTTCCTATGAAACCTCTTCAAGCACTCAAAGGTTGTTTTGATGTCGGTGATGATGATGTCAATAATACTAGTCCAAGAGATTTGGATCACAACTATGGAAGAATCGATAATGAAAGTTCTGGGCCAAGTAATTTGTCGCCTCAAAATGCTCAGCCTAAGAAGTTTTTGAGTGGCTCTTTACAATCTGATAATTTTCCCAAAAAGGTTACTGACGGGGACAGGGATTATCTACAAACAAAATATCCTTCCGAGCGGAATCACAGTGGTCCATTGTTATATCGGCAGAGGAGAGATATCAACAACTTTCCATCGGTTGATGACACATCAGAAGGCGCAATTGTCCAGCGTAGGGGTCGGTTTAAGGTCACATCTGCAGATCCCAGTTCAATGGGTCTTTCAAACAACACCGCCTGTCCAGTTGCTGTAAGTCCTACTCCTACCAGTCCCCCAAATCAGAACTCAATGGCTGCTTCTATTCTTCCATCACTGCAGTGCATCTTGCAACAGAATGGCTTGCAAAGGGAAGAAATTGTTAAATTGATAAAGTATGCAGAGCAATCTTATGGTAAGAATACAGAATCAATAGAGGCAGGAGCATCTGATGCTCTGCAGTGCTACTTGCAGGCATCACCTGCATCAACTAGAGAGAGAGAGCTGCATTTGCAAGTGATTCAACTCCAACAGAGCATTGGGAGCCTTGTCGAGGAATTGCAGAGACAAAAGCTGAAAAATGTTCAGTTAGAGAGACAGTTGAGCAGTATGGTCAACAAAGTTGAAAAGTGA 2019 0.4195 MERISEKRYPLSAKDYKLYEEVGEGVSASVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNLLRAHCSFTAGHSLWVVMPFMSGGSCLHIMKSSFPEGFDEPVIATVLREVLKALVYLHAHGHIHRDVKAGNILLDSNGSVKMADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVATCLVKDPKKRPSSEKLLKHHFFKHARATEYLSRTILDGLAPLGDRFRMLKAKEADLLMQNKALYEDMEQLSQKEYIRGISAWNFNLEDLKSQAALIQDADMSNAEEPDTDKRNKDISNDLKVSAEDPSASNHSDGASTLDKEDGFNNIQDLESSLASFPMKPLQALKGCFDVGDDDVNNTSPRDLDHNYGRIDNESSGPSNLSPQNAQPKKFLSGSLQSDNFPKKVTDGDRDYLQTKYPSERNHSGPLLYRQRRDINNFPSVDDTSEGAIVQRRGRFKVTSADPSSMGLSNNTACPVAVSPTPTSPPNQNSMAASILPSLQCILQQNGLQREEIVKLIKYAEQSYGKNTESIEAGASDALQCYLQASPASTRERELHLQVIQLQQSIGSLVEELQRQKLKNVQLERQLSSMVNKVEK* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3952 672 SUPERFAMILY Protein kinase-like (PK-like) 14 278 IPR011009 -
Mal6g3952 672 Coils Coil 642 672 - -
Mal6g3952 672 Gene3D Transferase(Phosphotransferase) domain 1 97 336 - -
Mal6g3952 672 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 669 - -
Mal6g3952 672 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3952 672 MobiDBLite consensus disorder prediction 432 446 - -
Mal6g3952 672 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Mal6g3952 672 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 669 - -
Mal6g3952 672 MobiDBLite consensus disorder prediction 448 478 - -
Mal6g3952 672 Gene3D Phosphorylase Kinase; domain 1 5 93 - -
Mal6g3952 672 MobiDBLite consensus disorder prediction 479 493 - -
Mal6g3952 672 MobiDBLite consensus disorder prediction 376 398 - -
Mal6g3952 672 CDD STKc_OSR1_SPAK 14 277 - -
Mal6g3952 672 MobiDBLite consensus disorder prediction 432 500 - -
Mal6g3952 672 MobiDBLite consensus disorder prediction 378 398 - -
Mal6g3952 672 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3952 672 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3952 Mal-Chr6 114376953 114383604 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3952 1 669 MAP Kinase Kinase Kinase Kinase AT5G14720 65.412 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Mal6g3952 Pkinase 6.1e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3952 K08835 - gmx:100778837 1086.63