Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3948 ATGAACGATATTTATATGCTTAAATTTCTTCTAGGTGATCAACTCTCAATAGCGAAAGAAACAGGACGCCGTCTTGGAATGGGAACTAACATGTACCCTTCATCATCTTTATTGGGCCAGAACAAGGATGAAGGAACTGGCCTCTTACCAGTTGATGATTTGATCAAGAAAGCAGATGGATTTGCCGGTGTTTTTCCTGGTACAACTATGACAATATCCAAGGATAGGGTAAAGCCATCTCCATATCCAGATAGTTGGAAGCTGGCAGAGATATTTACCACTGGAATAATTCTTGGTGGTTATTTGGCTATGATGACAGTTATTTTCTTTTGGGCAGCTTATAAAACAGATTTTTTCCCTAGAACATTTGGGGTCTCAAGTCTCAATAAAGAGGATATGGATGACATAAGAATGCTTGCCTCAGCAATATACCTACAAGTTAGTACTATTAGTCAGGCCCTTATATTTGTAACGCGGTCGCGGAGTTGGTCTTTTCTTGAGCGCCCGGGTTTGTTACTTGTAGCAGCTTTTTTTATTGCTCAACTGCTAGCTACACTAATTGCAGTTTATGCAAATTGGAGTTTTGCTGCAATTGAAGGGATTGGATGGGGTTGGGCTGGTATTGTTTTGCTTTATAATCTCATCTTTTATAATCCACTTGATTTTATCAAGTTCATAATTTGA 684 0.3889 MNDIYMLKFLLGDQLSIAKETGRRLGMGTNMYPSSSLLGQNKDEGTGLLPVDDLIKKADGFAGVFPGTTMTISKDRVKPSPYPDSWKLAEIFTTGIILGGYLAMMTVIFFWAAYKTDFFPRTFGVSSLNKEDMDDIRMLASAIYLQVSTISQALIFVTRSRSWSFLERPGLLLVAAFFIAQLLATLIAVYANWSFAAIEGIGWGWAGIVLLYNLIFYNPLDFIKFII* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3948 227 Gene3D - 8 63 IPR023214 -
Mal6g3948 227 SUPERFAMILY Calcium ATPase, transmembrane domain M 70 226 IPR023298 -
Mal6g3948 227 PANTHER CALCIUM-TRANSPORTING ATPASE 7 66 - -
Mal6g3948 227 Gene3D - 64 227 - -
Mal6g3948 227 PANTHER CALCIUM-TRANSPORTING ATPASE 67 227 - -
Mal6g3948 227 PANTHER PLASMA MEMBRANE ATPASE 7 66 - -
Mal6g3948 227 PANTHER PLASMA MEMBRANE ATPASE 67 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3948 Mal-Chr6 114174223 114176051 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3948 7 74 Primary Pumps ATPases AT5G62670 72.059 5.81e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3948 K01535 - gmx:100805218 294.664