Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3947 ATGAACGATATTTATATGCTTAAATTTCTTCTAGGTGATCAACTCTCAATAGCGAAAGAAACAGGACGCCGTCTTGGAATGGGAACTAACATGTACCCTTCATCATCTTTATTGGGCCAGAACAAGGATGAAGGAACTGGCCTCTTACCAGTTGATGATTTGATCAAGAAAGCAGATGGATTTGCCGGTGTTTTTCCTGGTACAACTATGACAATATCCAAGGATAGGGTAAAGCCATCTCCATATCCAGATAGTTGGAAGCTGGCAGAGATATTTACCACTGGAATAATTCTTGGTGGTTATTTGGCTATGATGACAGTTATTTTCTTTTGGGCAGCTTATAAAACAGATTTTTTCCCTAGAACATTTGGGGTCTCAAGTCTCAATAAAGAGGATATGGATGACATAAGAATGCTTGCCTCAGCAATATACCTACAAGTTAGTACTATTAGTCAGGCCATTATATTTGTAACGCGGTCGCGGAGTTGGTCTTTTCTTGAGCGCCCGGGTTTGTTACTTGTAGCAGCTTTTTTTATTGCTCAACTACTAGCTACACTAATTGCAGTTTATGCAAATTGGAGTTTTGCTGCATTTGAAGGGATTGGATGGGGTTGGGCTGGTATTGCTTTGCTTTATAATCTCATCTTTTATAATCCACTTGATTTTATCAAGTTCATAATTCGATACGCATTGAGCAGCCGGGCTTGGGATCTTGTTTTTGAACAAAGGATTGCTTTTACAAGGATGAAAGATTTTGGAAAGGAAGAACGTGAACTTAAATGGGCGCATGCGCAGAGGACACTTCACGGTCTTCACCCCCCAGAGACCAAGATTTTCACTGAACACACAAATCATACAGAGCTTAATCATATGGCTGAAGAAGCTAAAAGACGAGCGGAGATCGCAGGTATGCATGCAAGAACTTATTTAGCAACCATGATTTGCTGA 948 0.403 MNDIYMLKFLLGDQLSIAKETGRRLGMGTNMYPSSSLLGQNKDEGTGLLPVDDLIKKADGFAGVFPGTTMTISKDRVKPSPYPDSWKLAEIFTTGIILGGYLAMMTVIFFWAAYKTDFFPRTFGVSSLNKEDMDDIRMLASAIYLQVSTISQAIIFVTRSRSWSFLERPGLLLVAAFFIAQLLATLIAVYANWSFAAFEGIGWGWAGIALLYNLIFYNPLDFIKFIIRYALSSRAWDLVFEQRIAFTRMKDFGKEERELKWAHAQRTLHGLHPPETKIFTEHTNHTELNHMAEEAKRRAEIAGMHARTYLATMIC* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3947 315 PANTHER CALCIUM-TRANSPORTING ATPASE 7 66 - -
Mal6g3947 315 Gene3D - 8 63 IPR023214 -
Mal6g3947 315 PANTHER PLASMA MEMBRANE ATPASE 67 307 - -
Mal6g3947 315 PANTHER PLASMA MEMBRANE ATPASE 7 66 - -
Mal6g3947 315 Gene3D - 283 309 - -
Mal6g3947 315 PANTHER CALCIUM-TRANSPORTING ATPASE 67 307 - -
Mal6g3947 315 Gene3D - 64 230 - -
Mal6g3947 315 SUPERFAMILY Calcium ATPase, transmembrane domain M 70 231 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3947 Mal-Chr6 114093829 114096229 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3947 7 74 Primary Pumps ATPases AT3G47950 72.059 6.74e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3947 K01535 - gmx:100818268 426.402