Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3912 ATGATCATGGCGGAACTAACCGATTCCACCGCCGCCGCCGGTAATAACCTCCCGCCACTACTTCCACCACCGCAACAACCACCACAGCTAGACACGCGCTCAATCCTCTGCATCGACCTCAACGAGATCCCTTCACCTTCTTCTTCCTTCGCCGAAACCCTACCTGACTCCACCATCGACATAGTTCGTACTTATCACGAGAATCCCGCTCCACCTCCCGGTGGTCCGGCGCCTCTTCCATCCGGTTCATCTCTCTGTACAGTTTGTTCTAAATCCTCCGGCGCGGGAAGCTCCGGCACCGGCTTAGTGTGTGATGGATGTGAGAGGAGTTTTCATTTAGCGTGTGCTGGGATACGCGGTGGAAGAATTGGAGCGGCGAGTATAGGAGAGTGGGTGTGTGGTGAGTGTTTAGCGGGGGGTGTGAAGAGTAAAAGATGGCCGTTGGGTGTGAAGAGTAAACAGTTGCTTGATATTAATGCTTCACCGCCTAGTGATGTTGATGGAGAGGAGTTGCATGAATCGAGAAAGCACACTATGGGTGATAAATCTTTTGCTGGCAATCAATTTGGTGCTCCAGCAGTGACATATTCAACCTTCAACAACGGGAGTGTGGTTGGCTTCCAAAGGGCATCTGGAGCTGTGACACATCCTGTTAGAGTGGGTTTTGAGGACATATTGAATCACACCCAATCAATGGCTAGAAGCTTTGAGGAAGTACCTTCTCAGACTCAAAGTCCAAATGAGTTAATTTTGCGAGCTCTTAGAGATTTTATAACTGAAAGGCATGGTGTACTGGTGGAAGGTTGGCGAGTGGATCTTAGACAATCAATGATCAGTTCTGACATGTATGCAGTTTATTGTGCACCCGATGGAAAGATATTCGATTCTGTGTATGAAGTAGCTAATTATCTGGGGCTACCGTCTGGCTACAATTCTATGGAATCTGAAATAAGAAATGAAATGTCTCTTTCTTCAGGTGGGCCTCACCTATCCAGAAAAAGGAAGTCTTCTAGAACTCTGGCAGCCAATGGTTTTGCGGAAAAGCAGACAACCTTGGTCAATAGTATGGAATGTGCTAATGCTCAGGGGACTGTTCCTAAAGCCTCTGAGATTGAAGGAAAAGAGAATGGTTACTCAGACCCTCATCAATCCACTGCCGGACTTCCTCTGCAGTTTAAGGACTTCTATGTTCTTTCTTTGGGAAAATTTGATGCGAGACCTTCATATTGTGATGTTAACCTTATCTTTCCTGTGGGTTATAAATCTTGTTGGCATGACAAGATTACAGGTTCTCTTTTTACATGCGAAGTTTTGGATGGGGGTGATTCTGGACCTAAATTTACGATTAAAAGGTGTTCATGTTCGGAATTTCCAATTCCAGATGGGTCAACCATCCTTTCAACGCACAGTCATTGTCAATTTGTGAGCAAAACCAACGAAGGCCAGAGAGAGACTAATGATAGTATGGATTTAGATTCTGATGAGAGTATTCTGATGATGCTTTCAGAACCTTGTGCACCAACAGAAGATGACATCTTGAGTTGTGTTGCTAGCTACTCAAATGACGCATATGCATCAGAAGGATTAAGGCCAGTTGCTGGTTCAGTTCAAGATAATACTGGAAACTCATTTTCTGATAATATGAATTTTGATGATGAAATTGGTGAAATTTTGGTGGAAGAGCAGTCCCCATTCTCAGCATGGAGAGTTATTTCTCAAAAGTTAGTCAATGCTTGCAAGGATATCTGCAAGAAGAAAGGAACTTTTAAATTCTATTGTAAACATGTTGAAAGTGAAATGGGATTACATAGACGGGATGTAAGGAATAGAGAAAGTGATACCCACTTCACTTTGTTGGATAAATTTTGTGGTTCACCTGGTTCTGTCAGCATTCCAGATACAATTTATGCAGACAGTGATCTGAAAGGCTTCTATGAGCTTTTAGATAAATGGTTGGAGCAGGATAGATTTGGACTCAATGCTGAATTTGTACAAGAAATATTGGAACCGCTTCTTGGTGTACAAGACTGTTTGCAATATGAACGTCTTACTAGTAGAAACAATAGCTCTTCATTGCCTACAGTGGAAAACGGTTACCTAGTGGTCGATTGTAAAGGTCAATCAAATTATTTGGATGAAGAAGCAGGTCAAGGTTTATACAGAAGTCCTAAGAAGGCAAGATTGACCGAGTACGCTAAGGAAGACCGATGTCCACCTCCTGGGAAACCACTGTGCTCTAGGGCTCCAACTGAACTCATTGGTGACATTGTTCAGGTATGGGAGCTTTTAGAGCGTTTTCATGTAATTCTAGACCTGACCAAACCGTTATTATTAGAGGAGGTTGAAAAGGAGCTAATCAACCCATGGTCTGATGAATTGGATTTCCTTAAGAAATCTGAGAGGGGAATGGGTGGAAGCTCACAAGGTGGAATCAGATTTCCTTCAGAATCCATGAAAGAGGAAGCCCAATGCTTTGGTGTAGCTCTGGCGAAGGCCCACAGTTCACTACTAAGAGTGCTAATCAGTGAATTGCAATCAAAGGTGGCTGCTCTGGTGGATCCAACTTCTGAACCTGGAGAGGCTCGGACAAGACGGGGAAGAAGGAAAGATATGGATAGCGCAGTTCCTTCTAAACGGACCAAGATCAATATGCTTCCAATCAATGAATGGACTTGGCCAGAACTAGCGCGTAGATACATCTTGGCTTTCTTATCCATGGACGGTAACCTTGAGTCTGCGGAAATTATTGCCCGGGAAAGTGGTAAAGTGTTTCGCTGCTTAAGAGGTGACGGTGGTTTGCTGTGTGGTTCCCTTCCTGGCGTGGCTGGGATGGAAGCTGATGCATTGTTGCTTGCGGAGGCTACAAAGAAGATTTTTGGTTCTCTGAGCAGAGAAAAAGATGTACTCATCATTGAAGAAGAGGAGGAGTCTGATGTAAAGGGTGCTTCTGAAATTAAATCGGCGAATGATGGTAATATTCCTGAATGGGCGCAGGTGCTGGAACCTGTCAGAAAGCTACCAACAAATGTGGGAACCCGAATCAGAAAGTGTGTTAATGAAGCTCTAGAGAAGAATCCGCCAGATTGGGCGAGGAAAATACTGGAGCACTCGATTAGTAAGGAAGTGTACAAGGGCAATGCATCTGGACCAACAAAGAAAGCAGTTCTTTCAGTGTTGAAGGATGTAACTGAAGGAATGCAACAGATTCCCAACCAGGGAAGGAAAAAGAAGATCATGATATCTATCTCTGATATTATTATGAAACAGTGCCGCATTGTATTACGTCGCGCAGCTGCTTCAGACGATTCTAAAGTTTTTTGCAATTTGCTGGGAAGAAAATTAATAAATTCTTCTGACAATGATGATGAGGGGCTTCTTGGAACTCCAGCTATGGTGGCCCGCCCTCTTGACTTCCGGACTATTGACCTAAGATTGGCTTCTGGAGCTTATGGTGGATCTCGTGAAGCTTTTCTCGAGGATGTACGTGAGCTGTGGAGCAATGTTCGTGTTGCTTTTGTGGATCAACCTGATTTAGTTGAACTGTCGGAAAAATTATCCCAGAATTTTGAATGTTTATACAATGAGGAGGTTGTCACCTACGTCCAAAAATTTACAGACTATGCTGCAGTGGGATGCATAAATGCTGAAATGAAAAAAGAAGTCAATGATTTTATTGCTTTATCAAATGAGATTCCGAAGGCCCCTTGGGATGAGGGAGTCTGTAAAGTTTGTGGCATCGACAGGGATGATGACAGTGTCTTACTGTGTGATACCTGTGATGCTGAGTATCATAAATATTGCTTGAACCCTCCACTTGTAAGGATCCCTGAAGGAAACTGGTACTGTCCATCTTGTGTTGGTGGTAAACATACAACTCAAGATCTCACAGAACGAACACAGATTACTGGAAAGCGAAGAAGTAAAAAATTCCATGGAGAAGTTAATTGTCTTTACTTGGAAGCATTAACTAATTTGTCGTCTGTAATTGAAGAAAAAGAATATTGGGAGTATAGTGTGGGAGAGAGAACGCTCCTTCTCAAGTTTTTATGCGATGAGTTGCTCAATTCTTCCCTGATACGACAGCATCTTGAGCAATGTTCAGAGTTGTCTGCTGAGTTACATCAGAAATTGCGTGCACTTTCTGGAGAGTTGAAAAACCTGAAAATTAAGGAAGATGTTTTATCCACAAAAGCTGCCAAATTTGGTACATTGTCACAATGTACCACTGGGGAAGTTGGTCTTAAGGAAGGGTTCACATCTTTGTTCTCAAATACTAGTAAATGTCTGGTTAAGCCACATACTATAACCTCCAATCCTAGTGGTCTTGGGGCATTTGTTGATAGTCTACCTTCAGAAGAGATTCTTAAAGAGAAATGTAGGTTCAATAGTGTTGATAAAAGCATATCTGTGACACATTCAGATTCTGATAGCCAAAATATGAATTCCATAGAAGGACAACTTAGGACCGTTCCTGTGGCTGTGGAGTCTCAGTGTACAGATAAATCCCCCAAGTCTTTTCCATCCTCAAATCACGTGCCTCAAGAAATAAATGGTTACAGTGAAGCAACTCATATTCAGGGTAACCACCATAAATGTGAGGTAAGGGATGTATCTACTTGTGCAGCATACCTGCAAGGACAATGTGTGCCTGTTGAAGTTTCCCAAAGTGCTGTGAATGAGTCGGAACCATACCACCTTGAGCTCAATGCTGTCAAGCGTAACATTTCAGTACTGCAAGACTCTATAAATAGCATAGGATCACAGCTTCTGAAGCTCCCTGTTCGTCAGGAATTTTTGGGTATTGATTCCATTGGCCGACTGTACTGGGCTTTGGCTACACGTAGAGGACGTTCACGTATAGTTGTTGATGCAAGCGCTGTTCTTCAGCATGGAAGAGGATTGTCAATTAGCAAAGATTCTGCAGAGAAGTTTTCTGCTCCTTTGATGTCCCAACCACTTGGTGCTTTAGGCAATAGTTCACCGTGGATTGTTTATGAAACTGATTCAGAAATTGAAGAGCTATTGGGTTGGTTAAAAGATTCTGACCCTAAAGAAAAAGAACTGAGAGATTCTATTATGCAGGGGCCAAAATATATACCTCAAGAGTTTATTAATGCACACACTGAAGGTCAGGTTGAGGACCAAGGACCTGTTTATTTGCTAAGAAATACAGCATTTAACTCTCTTGTTACGAAGGCCACTTCTTTGCTGGAAAAGAATTACGGTCCATTCCTTGAGTTGGATACTGCTGAGGTGTTGAAGAATCAAAGTAAAAATCCCAGAACAACTAATGATGAAAAGTTGTATAGGTGTGAGTGCCTAGAACCCATATGGCCTTCTAGGAAACATTGCTTGTATTGCCACAAAACATTTTTGAGCGATGTTGAGTTTGAGGGACACAATGATGGCAAATGTAAAGCAGGACTTCTGGCCTTGGCGAGGAATAAAGATAAAAGTGGATCTTCTAAAGGAAGAGGGAACTTGAAATGTGATACCTCACATGAAAAATTCAGAGCTGATGCAGAAACAGCTGGAACCTCAATCAATAGATGTTCCGAGCTAAGTTCGAGATTGATTAAATTTTCAAATGAATATCCCTCTTGCCCATTTAACTTCGAAGATATATGCTCAAAGTTTGTGACAAATGATTCCAACAAGGAACTGGTCAGAGAAATTGGTCTAATTGGTTCAGATGGTGTCCCATCCTTTGCGCCACGATTCTTAACCATAAAAGAGGTTGGCATTGATGGAGGTGCGTCTAAAGCTTCAGAAAGCCGGGTTTCTCAGGAAAACACTGATGGAGCTGGCATATTCCATGACCATAAATCAGGCAAATCTACTGAAAGTTTAGCTGCAAATGAAAGCAACAAAGCAGGAAAATCCAACCAATCATCTTTGGGAGAACAAAGAGATGAAAAGTTATCTTTTTGTAGTCCTGCTTCAGATAAGGGAGTTGATGGCTTCTGTGTGGTTCCTTTGTCGTCCTTGAGACCATTAGGTGGAAAAGTTTCTCCTATTTTGAAGCAACTAAAGATTAATCTACTTGATATGGATGCTGCACTTCCGAAAGTTGCTCTAAGACCATCAAAGGCACAGTTGGACAGAAGACAGGCCTGGTGTGCATTTGTTAAATCTGCAGCGACTATATATGAGATGGTTCAGGCAATAATTACACTGGAGGATATGATTAAGACGGAGTTCTTAAAGAATGACTGGTGGTACTGGTCATCATTCTCAGCTGCTGCCAAATCTTCTACTTTGCCTTCTCTTGCTCTTCGCATATACTCCCTTGATTCAGCCATTATGTATGAGAAAGTGCCCAATTCAAGTTTAACTGAGAGCTCTGATCCTCCCGCCGTAGCGGAACCGGTACCGGTGATCACCGTGGATGCAGATAAATCCAAAGCAAGCCGGAAGTCAAACAGGAAAAGGAAGGAATTGGATGGTTAA 6450 0.426 MIMAELTDSTAAAGNNLPPLLPPPQQPPQLDTRSILCIDLNEIPSPSSSFAETLPDSTIDIVRTYHENPAPPPGGPAPLPSGSSLCTVCSKSSGAGSSGTGLVCDGCERSFHLACAGIRGGRIGAASIGEWVCGECLAGGVKSKRWPLGVKSKQLLDINASPPSDVDGEELHESRKHTMGDKSFAGNQFGAPAVTYSTFNNGSVVGFQRASGAVTHPVRVGFEDILNHTQSMARSFEEVPSQTQSPNELILRALRDFITERHGVLVEGWRVDLRQSMISSDMYAVYCAPDGKIFDSVYEVANYLGLPSGYNSMESEIRNEMSLSSGGPHLSRKRKSSRTLAANGFAEKQTTLVNSMECANAQGTVPKASEIEGKENGYSDPHQSTAGLPLQFKDFYVLSLGKFDARPSYCDVNLIFPVGYKSCWHDKITGSLFTCEVLDGGDSGPKFTIKRCSCSEFPIPDGSTILSTHSHCQFVSKTNEGQRETNDSMDLDSDESILMMLSEPCAPTEDDILSCVASYSNDAYASEGLRPVAGSVQDNTGNSFSDNMNFDDEIGEILVEEQSPFSAWRVISQKLVNACKDICKKKGTFKFYCKHVESEMGLHRRDVRNRESDTHFTLLDKFCGSPGSVSIPDTIYADSDLKGFYELLDKWLEQDRFGLNAEFVQEILEPLLGVQDCLQYERLTSRNNSSSLPTVENGYLVVDCKGQSNYLDEEAGQGLYRSPKKARLTEYAKEDRCPPPGKPLCSRAPTELIGDIVQVWELLERFHVILDLTKPLLLEEVEKELINPWSDELDFLKKSERGMGGSSQGGIRFPSESMKEEAQCFGVALAKAHSSLLRVLISELQSKVAALVDPTSEPGEARTRRGRRKDMDSAVPSKRTKINMLPINEWTWPELARRYILAFLSMDGNLESAEIIARESGKVFRCLRGDGGLLCGSLPGVAGMEADALLLAEATKKIFGSLSREKDVLIIEEEEESDVKGASEIKSANDGNIPEWAQVLEPVRKLPTNVGTRIRKCVNEALEKNPPDWARKILEHSISKEVYKGNASGPTKKAVLSVLKDVTEGMQQIPNQGRKKKIMISISDIIMKQCRIVLRRAAASDDSKVFCNLLGRKLINSSDNDDEGLLGTPAMVARPLDFRTIDLRLASGAYGGSREAFLEDVRELWSNVRVAFVDQPDLVELSEKLSQNFECLYNEEVVTYVQKFTDYAAVGCINAEMKKEVNDFIALSNEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHKYCLNPPLVRIPEGNWYCPSCVGGKHTTQDLTERTQITGKRRSKKFHGEVNCLYLEALTNLSSVIEEKEYWEYSVGERTLLLKFLCDELLNSSLIRQHLEQCSELSAELHQKLRALSGELKNLKIKEDVLSTKAAKFGTLSQCTTGEVGLKEGFTSLFSNTSKCLVKPHTITSNPSGLGAFVDSLPSEEILKEKCRFNSVDKSISVTHSDSDSQNMNSIEGQLRTVPVAVESQCTDKSPKSFPSSNHVPQEINGYSEATHIQGNHHKCEVRDVSTCAAYLQGQCVPVEVSQSAVNESEPYHLELNAVKRNISVLQDSINSIGSQLLKLPVRQEFLGIDSIGRLYWALATRRGRSRIVVDASAVLQHGRGLSISKDSAEKFSAPLMSQPLGALGNSSPWIVYETDSEIEELLGWLKDSDPKEKELRDSIMQGPKYIPQEFINAHTEGQVEDQGPVYLLRNTAFNSLVTKATSLLEKNYGPFLELDTAEVLKNQSKNPRTTNDEKLYRCECLEPIWPSRKHCLYCHKTFLSDVEFEGHNDGKCKAGLLALARNKDKSGSSKGRGNLKCDTSHEKFRADAETAGTSINRCSELSSRLIKFSNEYPSCPFNFEDICSKFVTNDSNKELVREIGLIGSDGVPSFAPRFLTIKEVGIDGGASKASESRVSQENTDGAGIFHDHKSGKSTESLAANESNKAGKSNQSSLGEQRDEKLSFCSPASDKGVDGFCVVPLSSLRPLGGKVSPILKQLKINLLDMDAALPKVALRPSKAQLDRRQAWCAFVKSAATIYEMVQAIITLEDMIKTEFLKNDWWYWSSFSAAAKSSTLPSLALRIYSLDSAIMYEKVPNSSLTESSDPPAVAEPVPVITVDADKSKASRKSNRKRKELDG* 2150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3912 2149 Gene3D - 388 497 - -
Mal6g3912 2149 MobiDBLite consensus disorder prediction 858 875 - -
Mal6g3912 2149 MobiDBLite consensus disorder prediction 853 875 - -
Mal6g3912 2149 ProSiteProfiles Zinc finger PHD-type profile. 1238 1288 IPR019787 -
Mal6g3912 2149 SUPERFAMILY FYVE/PHD zinc finger 1233 1291 IPR011011 -
Mal6g3912 2149 MobiDBLite consensus disorder prediction 1919 1973 - -
Mal6g3912 2149 ProSitePatterns Zinc finger PHD-type signature. 86 136 IPR019786 -
Mal6g3912 2149 MobiDBLite consensus disorder prediction 1 27 - -
Mal6g3912 2149 Gene3D - 1082 1204 IPR036427 GO:0005515
Mal6g3912 2149 Pfam Methyl-CpG binding domain 256 307 IPR001739 GO:0003677
Mal6g3912 2149 SUPERFAMILY Bromodomain 1075 1195 IPR036427 GO:0005515
Mal6g3912 2149 SUPERFAMILY FYVE/PHD zinc finger 66 137 IPR011011 -
Mal6g3912 2149 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 140 IPR013083 -
Mal6g3912 2149 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1320 1364 IPR028942 -
Mal6g3912 2149 PANTHER OS02G0192300 PROTEIN 32 2149 - -
Mal6g3912 2149 ProSiteProfiles Bromodomain profile. 1131 1179 IPR001487 GO:0005515
Mal6g3912 2149 ProSiteProfiles FYR domain FYRN motif profile. 387 440 IPR003888 GO:0005634
Mal6g3912 2149 MobiDBLite consensus disorder prediction 1948 1971 - -
Mal6g3912 2149 ProSitePatterns Zinc finger PHD-type signature. 1241 1285 IPR019786 -
Mal6g3912 2149 Pfam PHD-finger 86 137 IPR019787 -
Mal6g3912 2149 Pfam PHD-finger 1240 1286 IPR019787 -
Mal6g3912 2149 Coils Coil 1370 1390 - -
Mal6g3912 2149 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1227 1310 IPR013083 -
Mal6g3912 2149 SMART PHD_3 1240 1286 IPR001965 -
Mal6g3912 2149 SMART PHD_3 85 137 IPR001965 -
Mal6g3912 2149 ProSiteProfiles Zinc finger PHD-type profile. 83 139 IPR019787 -
Mal6g3912 2149 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 32 2149 - -
Mal6g3912 2149 CDD PHD1_Lid2p_like 1240 1285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3912 Mal-Chr6 113325637 113338089 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3912 31 2149 C2H2 Transcription Factor Family AT3G01460 44.849 0.0 1640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mal6g3912 MBD 2.8e-07 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3912 6 113325637 113338089 Mal6g3912 6 113325637 113338089 ECH