Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3904 ATGGAATTTGTTATAGTTTCAGTACTAATTGTTGTGGGAATTGTGCTTTTGGTCCTATCTCGTATGTGTTTTCCTGTTGGGATTTATAGTAGAGTAGGAAGAGCAACAACAATGGTTGATAGGGGAAGAAGAAGCATTTCTAAAATTGATTTAGAGAAGCTTCCATGTTATGATTATGTTGCAAAAGAAAATGGAAGTGACCCTTTGGATTGTGCAATTTGTTTGGAGAATTTCACTATTGGAGATAAGTGTAGATTGTTGCCTATTTGCAAGCACAGTTTTCATGCTCAATGTGTTGACCAATGGCTTTTGAAGAATTCCATTTGTCCTATTTGTAGATCTATGGTTGATTTCCATTGTGCAAACAAAGTTGTTTTAGGTAACAATGGAAGAGAAAGCATAGAAAGTGGTTCATATAGAAATGTTGGTTTCGAATTGATAGAAAATAATCCAACATTAGATGTAGAATCACAAGAGCACTAA 483 0.3437 MEFVIVSVLIVVGIVLLVLSRMCFPVGIYSRVGRATTMVDRGRRSISKIDLEKLPCYDYVAKENGSDPLDCAICLENFTIGDKCRLLPICKHSFHAQCVDQWLLKNSICPICRSMVDFHCANKVVLGNNGRESIESGSYRNVGFELIENNPTLDVESQEH* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3904 160 SUPERFAMILY RING/U-box 61 119 - -
Mal6g3904 160 SMART ring_2 71 112 IPR001841 -
Mal6g3904 160 CDD RING-H2_PA-TM-RING 70 113 - -
Mal6g3904 160 ProSiteProfiles Zinc finger RING-type profile. 71 113 IPR001841 -
Mal6g3904 160 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 3 143 - -
Mal6g3904 160 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 3 143 - -
Mal6g3904 160 Pfam Ring finger domain 70 113 IPR001841 -
Mal6g3904 160 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 34 118 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3904 Mal-Chr6 113208682 113209164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3904 5 129 C3H Transcription Factor Family AT4G28890 29.577 4.90e-18 78.2