Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3902 ATGATGAATCCTTGTATAAAGTATTCTTGGCAATGGTGTATATGGATTTTGATTGGAGCAGCAACAATAGGGGCTATTTTGATATCATTTATCATTGCATACATCATTTATCTTAGCTTTTTCAGATCAGCCTCAGTACAAAATAAAGTGACATTTGGAAACTTATTAAAGAAAATTTCTTGTCCAAAAATTCCTATCAAGGAAGTGTATGCTGCCACCAATCATCTCAATGAAAAGAATATCATTGGGAAAGGAACTTCAGGTAAAGTCTATAAAGGTACAATGAAAAATAATCAACAAGTTGCAGTGAAGCACATAATCAATGATGATGGAAATATAGAAACTTTTGTAAGAGAAGTTACAAGTCTATCTCATGTCAAGCACCCAAATCTTGTTTCTTTGCTTGGCTGTTGTATTGATGGAGATGAATGTCTTCTTATCTATGAACTATGTCCAAATGGGAGTCTTTCAGAATGGCTATTTGGCAAGAACAAGGTGCTTTCATGGATAAAGAGGCTAGAAATTGCAATTGATAGTGCTAGAGGTGTTTGGTTTTTGCACACATATCAAGGAGGCTGCATTGTTCATCGTGACATCAAGCCAACAAATATCCTTCTAGGGTCAAACTTTGAGGCAAAACTATCAGATTTTGGATTGTCTAAAGTTATTGAGATAGGTGAAACATATGCTAGTTCAGAAGTGAGAGGGACTTTTGGATATGTGGATCCTGAATACCAAAGCAACCACCATGTGAATTCATCTGGTGATGTTTACAGTTTTGGCATGGTACTTCTACAAATTCTCTCTGGAAAGAGGGTCATAAATTTGAAACTCAAGAAACCAATGTCACTTAGTAAAATGGCAAAAACATTCACTAGGAATGGTAGCATTACAGAATTTGCTGATCCTAGACTTGAAGGAAATTATTCTGAAGAAGCATTTGATTTTACACTTCAATTGGCTCTATCATGCACATCCCTTGACCAACAAAGACCATCCATGGAACAAGTTGGCAAAACACTAGAAGAGGCATTATTGATTTCAAAGGGAAGTAAGATTTTTACTGAAGAAACTCTAGAAGACCTTAGTATTGCTAATGATCCATGA 1107 0.3559 MMNPCIKYSWQWCIWILIGAATIGAILISFIIAYIIYLSFFRSASVQNKVTFGNLLKKISCPKIPIKEVYAATNHLNEKNIIGKGTSGKVYKGTMKNNQQVAVKHIINDDGNIETFVREVTSLSHVKHPNLVSLLGCCIDGDECLLIYELCPNGSLSEWLFGKNKVLSWIKRLEIAIDSARGVWFLHTYQGGCIVHRDIKPTNILLGSNFEAKLSDFGLSKVIEIGETYASSEVRGTFGYVDPEYQSNHHVNSSGDVYSFGMVLLQILSGKRVINLKLKKPMSLSKMAKTFTRNGSITEFADPRLEGNYSEEAFDFTLQLALSCTSLDQQRPSMEQVGKTLEEALLISKGSKIFTEETLEDLSIANDP* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3902 368 SMART serkin_6 76 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3902 368 Gene3D Transferase(Phosphotransferase) domain 1 151 357 - -
Mal6g3902 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Mal6g3902 368 Gene3D Phosphorylase Kinase; domain 1 39 150 - -
Mal6g3902 368 SUPERFAMILY Protein kinase-like (PK-like) 59 341 IPR011009 -
Mal6g3902 368 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Mal6g3902 368 PANTHER OS01G0253100 PROTEIN 10 352 IPR045271 GO:0004714|GO:0006468
Mal6g3902 368 Pfam Protein kinase domain 78 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3902 368 ProSiteProfiles Protein kinase domain profile. 76 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal6g3902 368 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 10 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3902 Mal-Chr6 113200426 113204043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3902 25 364 Receptor kinase-like Gene Family AT1G53420 35.244 2.28e-60 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Mal6g3902 Pkinase 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3902 - - mtr:MTR_6g007690 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3902 6 113200426 113204043 Mal6g3902 6 113200426 113204043 ECH