Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3889 ATGGACAGAAGATGCTGTTACAAAGATTTGCTACCTTTTATTTCTCTTATTGGCAATGAATGCATCATCACTAGTGTATACACTTTGTTCAAAGTAGCTACTTTGCAAGGATTGAGTAACTATGTCTTTATTGCTTACTCTTATACTGTTTCAACTATTGTCCTTCTTCCTGTATATTTTTTCTATAGAAGATCAAGAGTGGTTCCTCAACTCAGTTTCTCCATCCTATTTAAAATTGCTCTTCTTGGAGTCATAGGATGTTCATCTCAGATCTTGGGGTATGCTGGCATCAGTTACAGTTCTCCTACACTTTCCTCTGCAATTGGAAACCTCATTCCTGCTTTTACCTTCATGTTAGCTGTCATTTGCAGGATGGAAAAGATAGCTATTAAAAGTAGAACCACACAAGCTAAGGTTTGGGGAAGCATTATATCAATATCAGGAGCATTTATAGTAACATTCTACAAAGGGAAATCAATCATCATTGCTCATAATTCCCCTTCCATTCACCTTCCACACTCAAATGGCATTCTTACTTCAATTGATACAAATTGGGCCATTGGTGGGTTTCTGCTAACAGTATCCAATATACTACTTACAATATGGTTCATTGCTCAGGTGGAAATCATGAAGGAGATTCCAGATGAACTAACTATGGTCTTCCTTCACAACATATTTGCAACCATTTTAGCTTTAAGTGTAGGTTTATTAGCAGAGACAAATAGGAGTCTTTGGAAAATAAAACTAGACATATCACTAATCTCTATTATCTGCACGGGAATATTTGGCAAGTTCCTGAGCAGTGCAGTATATGCTTGGGCAATACACATAAAGGGTCCTGTATATGCTACAATGTTCAAGCCACTTTCAATTGTTATTGCTGTTGTCATGGGCATTGTGTTCCTTGGTGATACTCTTCACATTGGAAGTATAATTGGAGGCACAGTAATATCAATTGGGTTTTATACTGTAATGTGGGGCAAAGCAATGGAAGAGGAGGAGGATGGTTTTGGTAGCCAGGAATCACAAACTATTGAAAATGTTCCTCTCTTGAAAGATTATAAAACTCTAAAATTCTAA 1080 0.3685 MDRRCCYKDLLPFISLIGNECIITSVYTLFKVATLQGLSNYVFIAYSYTVSTIVLLPVYFFYRRSRVVPQLSFSILFKIALLGVIGCSSQILGYAGISYSSPTLSSAIGNLIPAFTFMLAVICRMEKIAIKSRTTQAKVWGSIISISGAFIVTFYKGKSIIIAHNSPSIHLPHSNGILTSIDTNWAIGGFLLTVSNILLTIWFIAQVEIMKEIPDELTMVFLHNIFATILALSVGLLAETNRSLWKIKLDISLISIICTGIFGKFLSSAVYAWAIHIKGPVYATMFKPLSIVIAVVMGIVFLGDTLHIGSIIGGTVISIGFYTVMWGKAMEEEEDGFGSQESQTIENVPLLKDYKTLKF* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3889 359 PANTHER WAT1-RELATED PROTEIN 9 350 IPR030184 GO:0016021|GO:0022857
Mal6g3889 359 Pfam EamA-like transporter family 22 153 IPR000620 GO:0016020|GO:0016021
Mal6g3889 359 Pfam EamA-like transporter family 188 325 IPR000620 GO:0016020|GO:0016021
Mal6g3889 359 PANTHER WAT1-RELATED PROTEIN 9 350 - -
Mal6g3889 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3889 Mal-Chr6 112972125 112976543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3889 8 353 Nodulin-like Gene Family AT5G40240 48.000 3.22e-112 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3889 - - mtr:MTR_6g007760 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3889 6 112972125 112976543 Mal6g3889 6 112972125 112976543 ECH
Mal6g1680 6 31633342 31639624 Mal6g3889 6 112972125 112976543 ECH