Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3884 ATGTATGGGTTTGGTGGTGAGAAGAAGTGGAAACACAATCGGCACATGTGGCCTGTACCTTCTAACCCGACCACTGTAGTCACCGTTTCTTCACCGTCAAAATTTATATGCAAAGATGGACGCAAGATTCGTGTTGGTGACTGTGCACTTTTCAAACCTCCCCAGGACTCGCCTCCTTTTATTGGAATAATTCGCAAGTTAATATTTAATAAAGAAGAAAGTCCAAGTTTAGAAGTGAATTGGTTTTACCGACCTGCTGATTTGAAGCTCTCTAAAGGGATTGCAGTGGAAGCTGCACCAAACGAAGTCTTTTACTCCTTTCACAAGGATGAGACATATGCTGCATCATTACTCCATCCTTGTAAAGTCGCATTTCTCCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCGCATTTGTTTGTAGACGAGTGTACGACATTGACAACAATTGTTTACGGTGGCTGACTGATAAGGACTACATTGATGAACAGCAGGAAGAAGTTGACAAGCTATTAGACAAGACAAAACTAGAAATGCATGGGGCTGTGCAGTCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCAACGTCAACACAGTCATTGAAATCTAGTTCTGATAACATTCAAAATAGTTCTTCCTTCGGTGTACAGGGTAAGGGAAAAAAGAGAGAGCGAGGTGATCAGGGATCTGATTCATCTAAAAAAGAGCGATTTTTTAAGGTAGAAGTTGGAGATTCTGGTCAATATAGACTGGAGATGCTAAGGTCCGAGATTGCTAGAATCACTGATAAAGGCAAGCTTGTGGACTTTGAAGGGGTTGAAAGATTTGTACAGCTCATGCAACCTGACAGTGCTGATAAAAAAATTGATTTGGCTGGGAGAATGATGCTTGTTGATGTAATATCGCTCACAGAACAGTATGACTGTCTTGGCTGGTTCGTTCAGCTCCGTGGTTTGCCCGTGTTAGATGAATGGCTACAGGAGGTCCATAAGGGGAAAATTGGCGACGGTAATGTTGATAAGTCTGAAGAATTTTTGTTAGCTTTACTCCGTGCATTGGATAAGCTTCCTGTGAACCTTCATGCGTTGCAAACCTGCAATGTTGGAAAATCTGTTAATAATTTACGTAGCCACAAAAATTCTGAAATTCAGAGGAAAGCCAGGAGTTTAGTAGACACATGGAAGAAGCGTGTTGAAGCTGAAATGAATATGACTGATTCAAAACCTGGTTCAACCCGTGCTGTTTCTTGGCCCACAAAGCCTACACCGTCGTCAGATGTTTCTCACTCTGGAAATAGAAAAACGGGAGGATCCTCTGAGAATGTTGCAAAGAGCTCTCCTATTCAACCTTCAGCATCCAAAAATTCTCAGTCTAAACATAATTCTGGAGAAGTACTATCCAAGTTCTCTTCATCCCCTGGTTCAACTAAATCGGTGACTGCCTCAGTAGGCAGCAATGCAAAAGATCAAAATGTTAAACTTATTGCTGGTGCAACAACATCAGATCTACCTTTGACACCTATCAAGGAGGAGAGGAGCAGCAGTTCTAGTCAATCTCAAAATAACAGCAGATCTTGTTCTAGTGAACATGCGAAGAGCTCCACTGCAGGGTCAATGAGTGGTAGCAAAGTTCCTGGTGGTGCATCCCGAAGTCGGAAGTCGAGTAATGGTGTGCATGGAGCTGGCGTTGCTGTAGTTCTGAAGGATCATAGCTCTTTCAAGAATTCAACAAAAAGTTCACCTTCTGATAAAGTTTCGCCGACCCGAATGTCACATGAAAAATCATCTGATCAGCCTCTTACCGATCAAGGGCATAATCAGCGACTGATTGTGAGGTTGCCAAACACTGGGCGCAGTCCTTCCAGGGGAGCTAGTGGGGGCACTTCTGAAGAACCTGCTAATACATGTGGCAAAACCTCACCTCCTGCCGACAAGAATGAGAATCAGGACAGGAGAGTTAAAGCTAAAACTGATTGTTTGCAGACCCATGTATCGAATGTGATGAATGATGCATCCAATACTACTGGTTGCGATGAACCTAAGTGCTCTCCGCGAGTGGATGAGCGGTGCAGGGCTAATGAAGATGGTGATAAAGTTGCAGAAACATCAAAAACAACCAGTTCTTCAACTGGATTTGTTTCCAGATCAGGGCAGACTTATGATGCTTCTTTAAGCCCCATGAATGCATTAGTGGAGAGCTGTGTGAAATTTTCTGAAGCAAGTTCCTCTGTGTCCCCCGGAGATGATGGTATGAATCTGCTTGCTTCTGTGGCCGCAAGAGAAATGTCCAGATCTGAAAATGTCTCGCCTCTGCCTTCACCCGAGAGGAAGTCTCCTGCAGCTGATGAATCAAGCTCAGGGAATGATCGACATTCTTTTGAAGCAGCTGGTCGCACTCTTATACAGTCTGATGGTGGGGCTACCGGAGAGCATCCTTTGAATACTTCACAATTCAAAAATAATTCTAGGCATCTGGTGACTACAGTATCGCGTGATATTTCAGATGGTGAAGCCGTTTCATCTAGCTGTGTGGAGAAAACCGGTGATGGTAAAACGCAAGTAAATTTCTCTACTACAGACGCGATGCAGAATGCTGAAGGTCCATGCTTACGTCCTGACACCAAAGAGGATACTTCTGAAACCGTGTTTCCAGGTCGAAAGGAGTCTCATGCAGAAGCTGGAGGAGCAGAGGGTTTTCTGGAACGGAGGGAATTGGGAACTCATTGGGCTAAAAACAGTAGTCCAGGCTCGAAATTAAAGTCAAGGACTTCCTCTTTTGACGATGATCAGAAGAATGATAACATGGTTGGCAGTATCGCAGAGCACGGGAAAATGTTAGTTTCAGAAACCGTTGCAAGTGGTATAATTGAAAATGAACAAGGTAAAAAATCCCCCGAGTTATCTTCAGCTGTAGATAGTAAGAACCAGATCAGTGCGGAGAAAGTGACGGATAGTATTATGCCTGCGCAAAAAGGCTCTCCAGTTGCAGATACCTGTGAGTCCATTGATGTAAAAAGGGAGGATGTTATGTTACCTGCTTCTGGTAATGCTTTGACGGTATCCAGGGATGAAAATGCCAATAATGTGATGCCAGGTGCGATCGAGCCTTCTGAGAAACGAACGGATCTGGATTCAGCAGTTGCAGATGGTATTAATGAACGTTGTGAAGAGAATCCTGGTAAAAAGGAGCTTATAGGCGGTTCATCAGTTCACTCAGATATACCAATTATTTCTGAAAAGGAGAACGAAGTGCCCGAAACATGTGATTCTAATACAGAAGGAAAGAAACCTGTAGTTGCTTCAGAGTTGAATGCAGGCAATGCTAATCCATCCCCAATTGCCAGTGGTTCTGATTCAGCTGTAAAGCTGGACTTTGATTTAAATGAGGGATACCCCATTGAAGATGTAGGTCAAGGAGATATTGTTAGACAGGAAGAAGCTATCAGTTCATCTGCAGTTCATGTTCCTTGCCCATTGCCTTTTCCCATTCCATCCCTCTCTGGGGCCTTCCATTCTTCAATTACAGTGGCTTCTGCTACCAAAGGACCAGTTGTTTTACCAGAAAATCCGTTGCGGAGTAAGGGGGAACTTGGATGGAAAGGGTCAGCTGCTACAAGTGCATTTCGCCCAGCTGAACCTAGGAAAAACGCTGAGATGCCATCAAATACTGGCGATATTCCTTCCGTTGATGCGACTTCAGTCAAACCAGGCCGCGCTCCTTTAGATTTTGATTTAAATGTGGCAGATGAAATAAGTTTTGAAGACATTGCTTACCGGGGTTCCTTAGAGTCGGGATCAAATGACCGCAGCGCTGTGGGATTTGATCTTGATCTAAACAGGTTAGATGAGACTCCTGAGGCTGGATCTTTCTCTATGAGTAAAATGGATATTCCTTCTTTACCAAGTAAACAACCTTCATTGTCCAGTGGGTTATCTAATGGCGGAAGTGTCTCAAGAGACTTTGATTTAAATAATGGGCCAGGCCTTGATGAGGTTAGCACTGAAGTCCCAGCTCGTAGTCTGCAGATGAAAAGTGCTGTGCCATTTCCAAGTTCTGTTCATGGCACCAGAACAAATAATGCTGAATTTGGGAACTATTCTTCATGGTTTCCTCCGGGCAATTCATATTCTGCAATTACTGTCCCACCCCTTCTGCCTGGTAGAGGGGAACAGAGTTATGTTGGTGGTTCTGGGCCACAGCGGATCATAGGTTCAACAGGTAGCACACCTTTTAATCCTGAAATGTACAGAGGGCCAGTACTTTCATCCTCTCCAGCTGTTGCATATCCACCTACAACCCCCTTTCCATATCCAGGATTTCCATTTGAAACCAATTTTCCATTATCTTCAAACGCCTTTTCTGGTTGTTCAACACCATTTATGGATTCATCAACTGTTGGTGGACTTTGCTTTCCTACTATGCCCTCGCAGCCGGTTGGGCCTGGAGGCGTTGTCTCATCGACATATCCCCGTCCTTATGTTATGAGTCTTCCAGGCAGTACAAGTAACGTAATTCCCGACAGCAGAAAATGGGGAAGTCAGAGTTTGGATCTTAATTCAGGCCCTGGTGGTACAGACATTGAGCGCAGAGATGACAGATTGCCTTCAGGATTGAGGCAGATGCCTGTCCCAAGTCCACAGGCATTGATGGAGGATCACTTGAAGATGTTTCAAATGGCCGGTGCATTAAAAAGAAAGGAACCTGATGGTGGTTGGGATGGTACTGATAGATTCAGTTACAAACATCCCCCCTCATGGCAATAG 4767 0.443 MYGFGGEKKWKHNRHMWPVPSNPTTVVTVSSPSKFICKDGRKIRVGDCALFKPPQDSPPFIGIIRKLIFNKEESPSLEVNWFYRPADLKLSKGIAVEAAPNEVFYSFHKDETYAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIDNNCLRWLTDKDYIDEQQEEVDKLLDKTKLEMHGAVQSGGRSPKPLNGPTSTQSLKSSSDNIQNSSSFGVQGKGKKRERGDQGSDSSKKERFFKVEVGDSGQYRLEMLRSEIARITDKGKLVDFEGVERFVQLMQPDSADKKIDLAGRMMLVDVISLTEQYDCLGWFVQLRGLPVLDEWLQEVHKGKIGDGNVDKSEEFLLALLRALDKLPVNLHALQTCNVGKSVNNLRSHKNSEIQRKARSLVDTWKKRVEAEMNMTDSKPGSTRAVSWPTKPTPSSDVSHSGNRKTGGSSENVAKSSPIQPSASKNSQSKHNSGEVLSKFSSSPGSTKSVTASVGSNAKDQNVKLIAGATTSDLPLTPIKEERSSSSSQSQNNSRSCSSEHAKSSTAGSMSGSKVPGGASRSRKSSNGVHGAGVAVVLKDHSSFKNSTKSSPSDKVSPTRMSHEKSSDQPLTDQGHNQRLIVRLPNTGRSPSRGASGGTSEEPANTCGKTSPPADKNENQDRRVKAKTDCLQTHVSNVMNDASNTTGCDEPKCSPRVDERCRANEDGDKVAETSKTTSSSTGFVSRSGQTYDASLSPMNALVESCVKFSEASSSVSPGDDGMNLLASVAAREMSRSENVSPLPSPERKSPAADESSSGNDRHSFEAAGRTLIQSDGGATGEHPLNTSQFKNNSRHLVTTVSRDISDGEAVSSSCVEKTGDGKTQVNFSTTDAMQNAEGPCLRPDTKEDTSETVFPGRKESHAEAGGAEGFLERRELGTHWAKNSSPGSKLKSRTSSFDDDQKNDNMVGSIAEHGKMLVSETVASGIIENEQGKKSPELSSAVDSKNQISAEKVTDSIMPAQKGSPVADTCESIDVKREDVMLPASGNALTVSRDENANNVMPGAIEPSEKRTDLDSAVADGINERCEENPGKKELIGGSSVHSDIPIISEKENEVPETCDSNTEGKKPVVASELNAGNANPSPIASGSDSAVKLDFDLNEGYPIEDVGQGDIVRQEEAISSSAVHVPCPLPFPIPSLSGAFHSSITVASATKGPVVLPENPLRSKGELGWKGSAATSAFRPAEPRKNAEMPSNTGDIPSVDATSVKPGRAPLDFDLNVADEISFEDIAYRGSLESGSNDRSAVGFDLDLNRLDETPEAGSFSMSKMDIPSLPSKQPSLSSGLSNGGSVSRDFDLNNGPGLDEVSTEVPARSLQMKSAVPFPSSVHGTRTNNAEFGNYSSWFPPGNSYSAITVPPLLPGRGEQSYVGGSGPQRIIGSTGSTPFNPEMYRGPVLSSSPAVAYPPTTPFPYPGFPFETNFPLSSNAFSGCSTPFMDSSTVGGLCFPTMPSQPVGPGGVVSSTYPRPYVMSLPGSTSNVIPDSRKWGSQSLDLNSGPGGTDIERRDDRLPSGLRQMPVPSPQALMEDHLKMFQMAGALKRKEPDGGWDGTDRFSYKHPPSWQ* 1589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3884 1588 MobiDBLite consensus disorder prediction 672 718 - -
Mal6g3884 1588 MobiDBLite consensus disorder prediction 1566 1588 - -
Mal6g3884 1588 MobiDBLite consensus disorder prediction 571 587 - -
Mal6g3884 1588 ProSiteProfiles BAH domain profile. 41 156 IPR001025 GO:0003682
Mal6g3884 1588 PANTHER BAH DOMAIN-CONTAINING PROTEIN 1 1588 - -
Mal6g3884 1588 ProSiteProfiles TFIIS N-terminal domain profile. 321 402 IPR017923 -
Mal6g3884 1588 MobiDBLite consensus disorder prediction 871 909 - -
Mal6g3884 1588 MobiDBLite consensus disorder prediction 1286 1318 - -
Mal6g3884 1588 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 274 403 IPR035441 -
Mal6g3884 1588 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1588 - -
Mal6g3884 1588 MobiDBLite consensus disorder prediction 762 793 - -
Mal6g3884 1588 SMART BAH_4 41 156 IPR001025 GO:0003682
Mal6g3884 1588 MobiDBLite consensus disorder prediction 601 644 - -
Mal6g3884 1588 MobiDBLite consensus disorder prediction 864 933 - -
Mal6g3884 1588 Gene3D - 25 245 IPR043151 -
Mal6g3884 1588 MobiDBLite consensus disorder prediction 1296 1318 - -
Mal6g3884 1588 MobiDBLite consensus disorder prediction 504 656 - -
Mal6g3884 1588 MobiDBLite consensus disorder prediction 1197 1234 - -
Mal6g3884 1588 MobiDBLite consensus disorder prediction 1506 1548 - -
Mal6g3884 1588 CDD TFIIS_I 331 400 - -
Mal6g3884 1588 MobiDBLite consensus disorder prediction 682 702 - -
Mal6g3884 1588 Pfam TFIIS helical bundle-like domain 350 399 IPR017923 -
Mal6g3884 1588 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 309 412 IPR035441 -
Mal6g3884 1588 SMART TFS2_5 327 401 IPR003617 GO:0005634
Mal6g3884 1588 MobiDBLite consensus disorder prediction 406 484 - -
Mal6g3884 1588 MobiDBLite consensus disorder prediction 219 238 - -
Mal6g3884 1588 MobiDBLite consensus disorder prediction 190 218 - -
Mal6g3884 1588 MobiDBLite consensus disorder prediction 1506 1522 - -
Mal6g3884 1588 Pfam BAH domain 42 147 IPR001025 GO:0003682
Mal6g3884 1588 MobiDBLite consensus disorder prediction 401 484 - -
Mal6g3884 1588 MobiDBLite consensus disorder prediction 703 718 - -
Mal6g3884 1588 MobiDBLite consensus disorder prediction 507 557 - -
Mal6g3884 1588 MobiDBLite consensus disorder prediction 180 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3884 Mal-Chr6 112830789 112837055 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mal6g3884 BAH 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3884 - - gmx:112998769 2205.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3884 6 112830789 112837055 Mal6g3884 6 112830789 112837055 ECH