Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3865 ATGGCATCAGGTGGAACAGAAGCTTTTCCAGATTTAGGTAAACATTGCCAGCAAGTTGATTGTAATCAGCTTGATTTTCTTCCTTTCACATGTGATGGCTGCAAACAGGTGTTTTGTGTGGAACATAGATCATGTAAGTCTCATGACTGTCCGAAACCTGACCACAACAGCAGAAAGGTGGTTGTGTGCGAAGAATGCTCTATGTCCATGGAGATCACAGACAACACCGGAGAAAACGAGGAGGCGATTTTAAAGAAACACCACAGTTCAGGGAAGTGTGACCCTAGCAAGAAGAAGAAACCAACTTGCCCCGTGAAGCGTTGCAAGGAGATTTTGACGTTTTCTAACACGAGTATCTGTAAAACTTGCCACATTAAGGTGTGCCTCAAGCACCGTTTTTCTGCTGATCATGCTTGTAGTAAAGGAAATTCATCTTCCTCATCAACAACTGCTATTGCAAATGGAAGGACAAATAATAGGTTTCTGGCTGCTTTGGCTTCAAGAAATGGTCAAGATTGTGCCAAAAAAACTGGATCTCGTTCTACTACTTCTCCTCCTAGTAATCCTTCTGTTAAGGCTTGTTGA 585 0.4256 MASGGTEAFPDLGKHCQQVDCNQLDFLPFTCDGCKQVFCVEHRSCKSHDCPKPDHNSRKVVVCEECSMSMEITDNTGENEEAILKKHHSSGKCDPSKKKKPTCPVKRCKEILTFSNTSICKTCHIKVCLKHRFSADHACSKGNSSSSSTTAIANGRTNNRFLAALASRNGQDCAKKTGSRSTTSPPSNPSVKAC* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3865 194 Gene3D - 2 67 IPR035896 -
Mal6g3865 194 MobiDBLite consensus disorder prediction 172 194 - -
Mal6g3865 194 Gene3D - 77 158 IPR035896 -
Mal6g3865 194 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 6 166 - -
Mal6g3865 194 SUPERFAMILY AN1-like Zinc finger 6 58 IPR035896 -
Mal6g3865 194 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 6 166 - -
Mal6g3865 194 SUPERFAMILY AN1-like Zinc finger 95 144 IPR035896 -
Mal6g3865 194 SMART AN1_Zf_4 103 144 IPR000058 GO:0008270
Mal6g3865 194 SMART AN1_Zf_4 16 55 IPR000058 GO:0008270
Mal6g3865 194 ProSiteProfiles Zinc finger AN1-type profile. 10 58 IPR000058 GO:0008270
Mal6g3865 194 ProSiteProfiles Zinc finger AN1-type profile. 97 147 IPR000058 GO:0008270
Mal6g3865 194 Pfam AN1-like Zinc finger 16 53 IPR000058 GO:0008270
Mal6g3865 194 Pfam AN1-like Zinc finger 103 141 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3865 Mal-Chr6 112590743 112591899 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3865 1 173 C2H2 Transcription Factor Family AT3G28210 60.116 1.83e-72 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3865 - - aprc:113867149 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3865 6 112590743 112591899 Mal6g3865 6 112590743 112591899 ECH