Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3841 ATGAAATTCAAACGATCCATATGTTCATCATGTGCTGATTCCTCCGGAAATGGAGGTGGCGGAGGTGGACTTGTTACTGGCGGTGGAGGAGCAACTACTTCCCGGAAACTGACAACCAATGATGCTTTATCTTATTTAAAGGCAGTGAAAACCACATTTCAGGATCAAAGAGAAAAATATGACATGTTCCTTCAGGTCATGAAAGATTTCAAGGCTGAAAAGACTGACACTTGTGGTGTCATAGCAAGTGTCAAGGAACTATTCAAAGGTCACAACAATTTAATTTTGGGATTCAACACTTTCCTACCAAAGGGATATGAGTTAAGACTTGATGAGGATGATGCTCCTCCAAAGAAAAAGGTTGAATTTGAAGAAGCTATTAGTTTCGTGAACAAGATAAAGATACGATTCCAAAATGACGAGCATGTTTACAAATCATTCTTGGACATTTTGAACATGTATCGCAAAGAGACTAAGGCCATCACTGAGGTTTACAGTGAGGTTGCTACCCTTTTTAAGGACCATAGTGATTTGCTCGAGGAGTTCACTAGATTCTTACCAGATAATTCGCTAGCACCTTCAACACAACATGCTCCATTTGGTCGAAATCAGCGATATCGGCGAGACCGATTTTCTTCTCATGATCGTGATATGGATGACGACAAAACAATGAACATGCACAAGGAGCAAAGGAAACGTGAGAGGAGGGATAGAAGAATTCGTGATCATGATAAGAGAGAACACAGTGATTTGAACTCACAACGCTCTCCTGACAAAAAGAAATCTGTTAAGAAGGCTGAAGCTGATGGATTGTCTTCTGGCTTTGCTTCTCATGATGATAAAGATAGCTTAAAGATCATGTATAGTCAAGCATTCAGTTTCTGTGAGAAAGTTAAGGAGAAGTTGAGCAGTACTGAGGACTACCAAACATTCTTGAAGTGCCTTCATAATTTTAGCAATGGAGTAACAAAAAAGAATGATTTACAAAATTTGGTGACCGATTTACTTGGGAAGCATTCTGATCTCATGAGCGAATTCAATGACTTGTTGGAGCGTTTTGAAAAGATTGACGGGTTCCTTGCTGGTGTCGCGAGTGAAAAGCCACTTGCTACCGATGGTCACTTATCAGAATCGGCCAAGTTGGAGGACAAAGAGAAAGAAAGATACAAGGAGAAATACATAGGAAAATCCATTCAAGAACTTGACCTTAGTGACGGCAAACGTTCTCCGAGCTACCAGCTTCTACCATCTGATGACAGGCATAACCTGGACATTGTTATACACATCGCGCGCGGTGAAAAGTCAGCCGTCGCAGGTTGCAGCCGTGGTAGCTGGCAATCTCAGTGGAGGCAGCGTGCATGGATTTGTCTTCTAATTTTTAATTTATTTTTATTTTATTTTACTTTTTTGAAAAAGTATTAG 1422 0.4044 MKFKRSICSSCADSSGNGGGGGGLVTGGGGATTSRKLTTNDALSYLKAVKTTFQDQREKYDMFLQVMKDFKAEKTDTCGVIASVKELFKGHNNLILGFNTFLPKGYELRLDEDDAPPKKKVEFEEAISFVNKIKIRFQNDEHVYKSFLDILNMYRKETKAITEVYSEVATLFKDHSDLLEEFTRFLPDNSLAPSTQHAPFGRNQRYRRDRFSSHDRDMDDDKTMNMHKEQRKRERRDRRIRDHDKREHSDLNSQRSPDKKKSVKKAEADGLSSGFASHDDKDSLKIMYSQAFSFCEKVKEKLSSTEDYQTFLKCLHNFSNGVTKKNDLQNLVTDLLGKHSDLMSEFNDLLERFEKIDGFLAGVASEKPLATDGHLSESAKLEDKEKERYKEKYIGKSIQELDLSDGKRSPSYQLLPSDDRHNLDIVIHIARGEKSAVAGCSRGSWQSQWRQRAWICLLIFNLFLFYFTFLKKY* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3841 473 SUPERFAMILY PAH2 domain 116 188 IPR036600 GO:0006355
Mal6g3841 473 Gene3D Paired amphipathic helix 282 354 IPR036600 GO:0006355
Mal6g3841 473 Gene3D Paired amphipathic helix 41 103 IPR036600 GO:0006355
Mal6g3841 473 Pfam Paired amphipathic helix repeat 306 348 IPR003822 GO:0006355
Mal6g3841 473 Pfam Paired amphipathic helix repeat 142 186 IPR003822 GO:0006355
Mal6g3841 473 Pfam Paired amphipathic helix repeat 58 102 IPR003822 GO:0006355
Mal6g3841 473 SUPERFAMILY PAH2 domain 283 350 IPR036600 GO:0006355
Mal6g3841 473 MobiDBLite consensus disorder prediction 202 267 - -
Mal6g3841 473 ProSiteProfiles PAH domain profile. 35 105 IPR003822 GO:0006355
Mal6g3841 473 PANTHER HISTONE DEACETYLASE INTERACTING DOMAIN, SIN3-RELATED 16 418 - -
Mal6g3841 473 PANTHER SIN3B-RELATED 16 418 IPR039774 GO:0003714
Mal6g3841 473 ProSiteProfiles PAH domain profile. 119 189 IPR003822 GO:0006355
Mal6g3841 473 ProSiteProfiles PAH domain profile. 284 353 IPR003822 GO:0006355
Mal6g3841 473 SUPERFAMILY PAH2 domain 33 104 IPR036600 GO:0006355
Mal6g3841 473 MobiDBLite consensus disorder prediction 190 274 - -
Mal6g3841 473 Gene3D Paired amphipathic helix 118 190 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3841 Mal-Chr6 112023300 112027862 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3841 24 116 WRKY Transcription Factor Family AT4G12020 55.319 7.66e-21 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal6g3841 PAH 4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3841 K11644 - gmx:100807181 562.377