Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3840 ATGAGAAAAGAAAAGGGTACAGCAAGCAAAATGGGGAGTGTTGATCAGAAAAATGTTTCCATTAATGTTAAGAAGATGAAAAAGAAAAATGGTTCTTTGAAGTCCATTTTCATGCATGCTGATATTCTTGATTGTTTTTTCATGGTTTTTGGTTTGTTTGGTGCCATTGGTGATGGCATATCGATTCCTTTGTTATTGTTCATCGCTGGCAGACTTATGAACTCTATTGGTGGTGTTTCTGACACATCAAGCAACAATTTTGTCCAAAACATCAATAAGAATGCTGTTCTTTTTTTATATTTGGCTTGTGCCACTTTTGTTGCTTGCTTCCTAGAGGGTTATTGTTGGACAAGAACAGGTGAAAGACAAGCAGCAAGAACGAGAGCAAGGTACTTAAAAGCAGTTCTAAGACAAGAAGTAGCATACTTTGATTTGCATGTTACAAGCACATCAGAAGTCATCACCAGTGTCTCCAATGATAGCCTTGTAATTCAAGATGTTATTAGCGAAAAGGTTCCAAATTTTTTGATGAATGCATCTATGTTCATTGGATGCTACATAGCAGCATTTGCAATGTTATGGAGATTGGCAATTGTTGGGTTCCCTTTTATTATTCTACTTGTGATTCCTGGTTTCATGTATGGAAGGATTTCGATGGGATTGGCTAGAAAAATTAGAGACGAGTACAATAAAGCCGGTACAATAGCAGAACAAGCAATATCCTCAATCAGAACTGTTTATTCCTTTACAGGAGAAAGCAAAACCATAGCTGCTTTCTCTGATGCTTTGGAAGGATCAGTGAAGTTGGGATTGAAACAAGGCTTAGCTAAAGGCTTAGGCATAGGAAGCAATGGTGTTGTTTTCGCTATATGGTCTCTTATGTCGTATTACGGTAGCAGAATGGTCATGTATCATGGTGCTAAAGGTGGTACCGTTTATTCAGTTGGAGTTTCAATAGCACTTGGTGGATTGGCTTTCGGAGCTGGTTTATCGAATGTGAAGTACTTCTCGGAAGCAAGTGCTGCAGGAGAAAGAATAATGGAAGTGATAAAAAGAGTTCCAAAGATTGATTCTGAAAATATGGAAGGTGAAATTCTTGAGAAAGTGTTAGGAGAAGTTGAATTCAACCATGTTGAATTTGTGTATCCATCAAGACCAGAAAGTGTGATCTTCAATGATTTTTGCTTAAAGATTCCATCAGGAAAAACAGTGGCATTAGTAGGAGGAAGTGGTTCAGGAAAATCAACAGTGGTATCACTTTTGCAAAGATTTTATGATCCAATTGGTGGAGAGATTCTTCTTGATGGAGTTGCTATTCATAAGTTGCAATTAAAGTGGCTTATGTCACAAATGGGTTTGGTGAGTCAAGAACCTGCTTTGTTTGCTACAAGTATTAAAGAGAATATACTTTTTGGAAGAGAGGATGCTACATTTGAAGATATTGTGAATGCTGCTAAAGCTTCTAATGCTCATAATTTCATTTCATTGTTGCCACAAGGATATGATACTCAGGTTGGGGAGAGGGGAGTACAAATGTCAGGGGGACAAAAGCAGAGGATTTCCATTGCAAGAGCTGTAATAAAAATGCCAAAAATCCTATTGTTGGACGAAGCAACAAGTGCACTCGATTATGAATCCGAACGAGTCGTCCAAGAAGCTCTAGACAAAGCCGCGGTTGGGCGCACCACCATCATCATCGCTCACCGCTTATCTACCATCCAAAATGCAGACATTATTGCCGTCATTCAAAATGGTAAGATCATGGAAACAGGATCTCACGAAAGCCTCATGCAAAATGACAATTCTCTTTACACCTCCCTCGTTCGTCTCCAACAAACTAGAAATGACCAAAGTGGCAACACTCCATCTATCATGAATAGAGATCACATGCAAAACACGAGTAGTTGTAGACTCGTGAGTCATCCGAGCTCCTACAACTCAATGACACGCGATGGTGATGATATCGTTAATTATAACAATGTTGTTGAAGATATTGTTAGTAATGATGTTGTGGTTGATGATCATAATAACAATGATAATAAATCTAATAAGAAAAAGGAGAAGGTCAAGGTTCCTTCGTTCCGAAGTTTGTTGGCAATGAATGTGCCAGAGTGGAAGCAAGCATGTTTGGGTTGTATAAATGCGATTTTATTCGGTGCAATTCAACCAGTAAATTCGTTTGCAATGGGGTCGGTTATATCGGTTTATTTTCTGGAGGACCATGATGAGATCAAGAAGCAAATTAGGATCTATGTGTTTTGTTTTCTAGGGTTGGCGGTTATCTCAATGGTTGTTAATGTGCTTCAACATTATAGCTTTGCTTACATGGGAGAGTACTTGACTAAGAGGATTAGAGAAAGAATGTTTTCTAAGATACTCACTTTTGAAGTTGGTTGGTTTGATGAAGATCAGAATTCTTCAGGCTCTGTTTGCTCTAGACTTGCCAAAGAAGCCAATGTGGTAAGATCTTTGGTGGGTGATAGATTGGCATTAGTAGTACAAACAATTTCAGCAGTGTTAATAGCATTCACAATGGGCTTAATCATTGCATGGAGACTGGCCATTGTTATGATAGCAGTTCAACCAATTATCATATGTTGTTTCTACACAAGGCTTGTCCTTCTTAAGAATATGTCAAGCAAAGCCATCAAGGCCCTAGATGAATGTAGCAAAATAGCTGCTGAAGCTGTTTCAAATCTAAGAACCATCAATGCTTTTTCATCTCAAGATAGAATCCTCAAAATGCTTGAAAAAGCTCAACAAGGTCCAAGTCATGAAAGTATTAGACATTCTTGGTTTGCAGGTATTGGGCTTGCATCTTCACAAAGTATCAATTTTTGTACTTGGGCTTTGGACTTTTGGTATGGCGGAAAACTTGTGTCGCAAGGTTATATCTCGGCTAAGGCGTTATTTGAGACTTTTATGATTTTGGTAAGTACTGGAAGAGTTATTGCTGATGCCGGTAGCATGACAAATGATCTTGCTAAAGGTTCTGATGTCGTTGGATCTGTGTTCGCTATCCTTGATAAGCATACAAAAATCGAGCCCGATGATATAGAAGGTTACAAAGCCGAAAAATTGATAGGAAAAATTGAACTTCAGGATGTGCATTTTGCATATCCGGCTAGACCTAATGTAATGATTTTTCAAGGGTTCTCGATTAAAATTGACGCCGCAAAATCGACTGCTTTGGTCGGAGAAAGTGGTTCTGGAAAATCGACAATCATAGGACTAATTGAGAGATTCTATGATCCAATTAAAGGGATAGTCACAATTGATGGTAGAGACATAAAGTCTTTTAATCTAAGATCATTAAGGAAACACATTGCACTTGTGAGTCAAGAACCAACATTGTTTGGTGGTACCATAAGGGAAAATATTGCATATGGAGCATATGATGATAAAGTTGATGAGAGTGAGATTATAGAGGCATCAAAGGCTGCCAATGCTCATGATTTTATATCAAGCTTAAAAGATGGTTATGAAACATTGTGTGGTGATAGAGGAGCTCAACTTAGTGGTGGTCAAAAGCAAAGAATTGCAATAGCTAGAGCTATATTGAAGAATCCAGAGGTGTTGCTTTTGGATGAAGCAACAAGTGCACTTGATAGTCAATCGGAGAAATTAGTGCAAGATGCTTTAGAAAGGGTTATGGTTGGAAGGACAAGTGTGGTTGTGGCACATAGGTTGAGTACTATACAAAATTGTGATTTGATTGCTGTTTTGGATAAGGGAAGTGTTGTTGAGAAAGGAACACATTCATCTTTGTTGTCTAAAGGGCCAAGTGGAGCTTATTACTCTTTGGTAAGTCTACAAAGAAGACCAACCAACATAATTGTTGATTCTTCACATGAAATGAACTAA 3864 0.3825 MRKEKGTASKMGSVDQKNVSINVKKMKKKNGSLKSIFMHADILDCFFMVFGLFGAIGDGISIPLLLFIAGRLMNSIGGVSDTSSNNFVQNINKNAVLFLYLACATFVACFLEGYCWTRTGERQAARTRARYLKAVLRQEVAYFDLHVTSTSEVITSVSNDSLVIQDVISEKVPNFLMNASMFIGCYIAAFAMLWRLAIVGFPFIILLVIPGFMYGRISMGLARKIRDEYNKAGTIAEQAISSIRTVYSFTGESKTIAAFSDALEGSVKLGLKQGLAKGLGIGSNGVVFAIWSLMSYYGSRMVMYHGAKGGTVYSVGVSIALGGLAFGAGLSNVKYFSEASAAGERIMEVIKRVPKIDSENMEGEILEKVLGEVEFNHVEFVYPSRPESVIFNDFCLKIPSGKTVALVGGSGSGKSTVVSLLQRFYDPIGGEILLDGVAIHKLQLKWLMSQMGLVSQEPALFATSIKENILFGREDATFEDIVNAAKASNAHNFISLLPQGYDTQVGERGVQMSGGQKQRISIARAVIKMPKILLLDEATSALDYESERVVQEALDKAAVGRTTIIIAHRLSTIQNADIIAVIQNGKIMETGSHESLMQNDNSLYTSLVRLQQTRNDQSGNTPSIMNRDHMQNTSSCRLVSHPSSYNSMTRDGDDIVNYNNVVEDIVSNDVVVDDHNNNDNKSNKKKEKVKVPSFRSLLAMNVPEWKQACLGCINAILFGAIQPVNSFAMGSVISVYFLEDHDEIKKQIRIYVFCFLGLAVISMVVNVLQHYSFAYMGEYLTKRIRERMFSKILTFEVGWFDEDQNSSGSVCSRLAKEANVVRSLVGDRLALVVQTISAVLIAFTMGLIIAWRLAIVMIAVQPIIICCFYTRLVLLKNMSSKAIKALDECSKIAAEAVSNLRTINAFSSQDRILKMLEKAQQGPSHESIRHSWFAGIGLASSQSINFCTWALDFWYGGKLVSQGYISAKALFETFMILVSTGRVIADAGSMTNDLAKGSDVVGSVFAILDKHTKIEPDDIEGYKAEKLIGKIELQDVHFAYPARPNVMIFQGFSIKIDAAKSTALVGESGSGKSTIIGLIERFYDPIKGIVTIDGRDIKSFNLRSLRKHIALVSQEPTLFGGTIRENIAYGAYDDKVDESEIIEASKAANAHDFISSLKDGYETLCGDRGAQLSGGQKQRIAIARAILKNPEVLLLDEATSALDSQSEKLVQDALERVMVGRTSVVVAHRLSTIQNCDLIAVLDKGSVVEKGTHSSLLSKGPSGAYYSLVSLQRRPTNIIVDSSHEMN* 1288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3840 1287 Gene3D ABC transporter type 1, transmembrane domain 656 1019 IPR036640 GO:0005524|GO:0016021
Mal6g3840 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1026 1272 IPR027417 -
Mal6g3840 1287 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 33 1277 - -
Mal6g3840 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 367 611 IPR027417 -
Mal6g3840 1287 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 715 996 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal6g3840 1287 CDD ABC_MTABC3_MDL1_MDL2 373 611 - -
Mal6g3840 1287 Gene3D - 363 612 IPR027417 -
Mal6g3840 1287 CDD ABC_6TM_Pgp_ABCB1_D1_like 48 346 - -
Mal6g3840 1287 Gene3D - 1021 1278 IPR027417 -
Mal6g3840 1287 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1031 1269 IPR003439 GO:0005524
Mal6g3840 1287 SMART AAA_5 400 592 IPR003593 -
Mal6g3840 1287 SMART AAA_5 1058 1252 IPR003593 -
Mal6g3840 1287 Pfam ABC transporter transmembrane region 710 978 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal6g3840 1287 Pfam ABC transporter transmembrane region 49 311 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal6g3840 1287 Gene3D ABC transporter type 1, transmembrane domain 36 632 IPR036640 GO:0005524|GO:0016021
Mal6g3840 1287 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 33 1277 IPR039421 -
Mal6g3840 1287 SUPERFAMILY ABC transporter transmembrane region 45 357 IPR036640 GO:0005524|GO:0016021
Mal6g3840 1287 CDD ABC_MTABC3_MDL1_MDL2 1031 1272 - -
Mal6g3840 1287 CDD ABC_6TM_Pgp_ABCB1_D2_like 698 1014 - -
Mal6g3840 1287 Pfam ABC transporter 1050 1200 IPR003439 GO:0005524
Mal6g3840 1287 ProSitePatterns ABC transporters family signature. 1172 1186 IPR017871 GO:0005524
Mal6g3840 1287 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 49 338 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal6g3840 1287 ProSitePatterns ABC transporters family signature. 512 526 IPR017871 GO:0005524
Mal6g3840 1287 Pfam ABC transporter 392 540 IPR003439 GO:0005524
Mal6g3840 1287 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 373 609 IPR003439 GO:0005524
Mal6g3840 1287 SUPERFAMILY ABC transporter transmembrane region 695 1015 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3840 Mal-Chr6 112004058 112017600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3840 24 1273 Calmodulin-binding Proteins AT2G36910 43.016 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3840 K05658 - mnt:21393795 1842.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3840 6 112004058 112017600 Mal6g3840 6 112004058 112017600 ECH