Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3809 ATGAATTTCATGAAAGAAACCAAGGCTTGTGCCGCATGCACATATCAAAGAAAAAAGTGTACCAATGAATGTGTGTTAGCTTGTAATTTTCCGGCCGATAAACCAACAATGTTTCGCGACGCTCATCGTTTGTTTGGTGTTTCTAACATACAAAAGATACTAAAGAAAATCAAGGACGGTGATAAAAGAGATGATGCAATGAAATCAATTATTTTTGAGTCGGATATTCATGCAAAATTTCCAAGTCAAGGATGTCTTGGTGTTATTAAGCAATATGAAAGTTTGATAAAGGAGGTTTTTGAAGAGTTAAAGCAAACAAATAGGCTATTAGCTTATTGTAAGCTAAACAACCTACAACAACAAAATCTTCATTCCTCCCTAGCTTCTACTAGTTCTCAAATTCCAATGTTCAACAATTATGGTGATGTTCCTAATTATTATCACAATAGTGAAAATAATAATATGATGATGGCATCTTCTTCTTATGTAAGTGACATCATTCCTCATGGTGTTAATAATACTCTTATTGACACAAATTCGAATATAAAGTCAACGGATACAATAGAGGTTGCACAATTGAGTGGTGTTAAGAACAACGGTGACGACAATGACATAGAAGAGAATTATAATATGATGGTAACAAAAGAGTTGTCTGATAATGAAGAATTTGATGGCGATCAAGTTGGAAATTTGGATTTTGATTTGATTGATATTGATATGTTGCTCAGCAAAGATGAACCTATGGAAACGGAATCAAAGGATGCATATCATGAGTTCACCAGGTATGAAATTGTTCTTTTAATTTTATTTTATTTTTGTTTAACTTTGTTATTATATAAATGCTAG 846 0.3227 MNFMKETKACAACTYQRKKCTNECVLACNFPADKPTMFRDAHRLFGVSNIQKILKKIKDGDKRDDAMKSIIFESDIHAKFPSQGCLGVIKQYESLIKEVFEELKQTNRLLAYCKLNNLQQQNLHSSLASTSSQIPMFNNYGDVPNYYHNSENNNMMMASSSYVSDIIPHGVNNTLIDTNSNIKSTDTIEVAQLSGVKNNGDDNDIEENYNMMVTKELSDNEEFDGDQVGNLDFDLIDIDMLLSKDEPMETESKDAYHEFTRYEIVLLILFYFCLTLLLYKC* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3809 281 Pfam Lateral organ boundaries (LOB) domain 9 106 IPR004883 -
Mal6g3809 281 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 206 - -
Mal6g3809 281 Coils Coil 89 109 - -
Mal6g3809 281 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 6 206 - -
Mal6g3809 281 ProSiteProfiles LOB domain profile. 8 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3809 Mal-Chr6 111066020 111066865 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3809 7 110 AS2 family AT3G47870 49.038 1.67e-28 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal6g3809 LOB 9.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3809 - - mtr:MTR_6g011200 246.514