Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3805 ATGAATTTCATGAAAGAAACTAAGGCTTGTGCCGCATGCACATATCAAAGAAAAAAGTGTACCAATGAATGTGTGTTAGCTCGTTATTTTCCGGCCGATAAACCAACAATGTTTCGCGACGCTCATCGTTTGTTTGGTGTTTCTAACATACAAAAGATACTAAAGAAAATCAAGGACGCTGATAAAAGAGATGATGCAATGAAATCCATTATTTATGAGTCGGATATTCATGCAAAATTTCCAATTCATGGATGTCTTGGTGTTATTAAGCAATATGAAAGTTTGATAAAGGAGGTTTTTGAAGAGTTAAATCAAACAAATAGGTTACTAGCTTATTGTAAGCTAAACAACCTACAACAACAAAATCTTTATTCCTCCAAACCTTCCACTAGCTCTCAAATTCCAATGTCCATAAATTATGGTGATGTTCCTAATTATTATTATCACAATAGTGAAAATAATAATATGATGATGGCATCTTCTTCTTATATTAGTGACAGCATTCCTCATGATGTTAATAATACTCTAATTGATACAAATTCGAATATAATGTCAACGGATACAACAAAGGTTAAGAACAACGGTGGTGACAATAACATAGAAGAGAATTATAATTTGATGGTGACAAAAGGGTTGTCTGATAATGAAGAATTTGATGGCGATCAAGTTGGAAATTTGGATTTTGATTTGATTGATATTGATATGTTGCTCAACGACGACGACAAACTTGTGGGAATGGAATCAAAGGATGCTTCAACAGGTATCAACTTGTTCTTTTAA 780 0.3295 MNFMKETKACAACTYQRKKCTNECVLARYFPADKPTMFRDAHRLFGVSNIQKILKKIKDADKRDDAMKSIIYESDIHAKFPIHGCLGVIKQYESLIKEVFEELNQTNRLLAYCKLNNLQQQNLYSSKPSTSSQIPMSINYGDVPNYYYHNSENNNMMMASSSYISDSIPHDVNNTLIDTNSNIMSTDTTKVKNNGGDNNIEENYNLMVTKGLSDNEEFDGDQVGNLDFDLIDIDMLLNDDDKLVGMESKDASTGINLFF* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3805 259 Pfam Lateral organ boundaries (LOB) domain 9 106 IPR004883 -
Mal6g3805 259 Coils Coil 89 109 - -
Mal6g3805 259 ProSiteProfiles LOB domain profile. 8 110 IPR004883 -
Mal6g3805 259 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 6 183 - -
Mal6g3805 259 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3805 Mal-Chr6 110844200 110844979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3805 7 110 AS2 family AT3G47870 49.038 1.96e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal6g3805 LOB 3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3805 - - mtr:MTR_6g011200 229.95