Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3804 ATGAATATCATCAAAACAAACAAGGCTTGTGCAGCATGCAAGTATCAAAGAAGAAAGTGTACTAGTGAATGTGTGTTAGCTCCTTATTTTCCGGCTGATAAACCAAAAATGTTTGGTGACGCTCATCGTTTGTTTGGTGTTTCAAACATTCAAAAGATACTAAATGATATCAAGGACGGTGATGAAAGAGATGATGCAATGAAATCAATTATCTTTGAGTCGAATATTCGAGCAAAATTCCCAATTCATGGATGTCTTGGTGTTATTAAGCACTATGAAGGTTTGTTAAAGGAGGCTTTTGAAGAGTTAAATCAAACAAATAAGCTACTAGCTTATTGTAAACTAAACGATATTCCAGTTTTCGACAATTATGGTGATGCTCCTAATTATTATGACAATAGTGAGAATAATGATATGATGGTAGCATCTTCTTCTTATTTTTGTAACACCATCCCTCATGATGTTAGTAATACTCTAATCGGTACAAATTCGAAAATAAATTCTACGGATACAACAAGGGTTGCACAATTGAGTGGTGTTAGCAATAGTGGTGATGACGATATCATAGAAGACAATGATAATTTGATGGGAACAAAAGGGTTATTTGATAATGAAGAATTTGATGGCGATAAATTAGGAATTTGGGATATGGATGATGTTTTCATTAACCTAGATGAACTCTTGGGAAAGAATAAATTTGATGAATTCAGCAGGTATTAA 720 0.3333 MNIIKTNKACAACKYQRRKCTSECVLAPYFPADKPKMFGDAHRLFGVSNIQKILNDIKDGDERDDAMKSIIFESNIRAKFPIHGCLGVIKHYEGLLKEAFEELNQTNKLLAYCKLNDIPVFDNYGDAPNYYDNSENNDMMVASSSYFCNTIPHDVSNTLIGTNSKINSTDTTRVAQLSGVSNSGDDDIIEDNDNLMGTKGLFDNEEFDGDKLGIWDMDDVFINLDELLGKNKFDEFSRY* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3804 239 Coils Coil 89 109 - -
Mal6g3804 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 6 157 - -
Mal6g3804 239 Pfam Lateral organ boundaries (LOB) domain 9 106 IPR004883 -
Mal6g3804 239 ProSiteProfiles LOB domain profile. 8 110 IPR004883 -
Mal6g3804 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3804 Mal-Chr6 110776741 110777460 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3804 6 110 AS2 family AT3G47870 53.333 3.28e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal6g3804 LOB 4.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3804 - - mtr:MTR_6g011200 261.536