Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g3803 ATGAATTTCAACAGAGGAGACCCAACAAACAAGGCTTGTGCAGCCTGCAAATTTCAAAGAAGAAAATGTTCAAAAGATTGTCTTCTAGCTCCTTATTTTCCGGCCGATAAACCAAAAATATTCAGCAACGCTCATCGTTTGTTTGGTGTTTCAAATATATCGAAGATCTTAAAGGATGTTAAGGAAGAATATAGAGGTGACGCGATGAAATCAATTATTTTTGAGTCGGATATGCGTGCTAGATTCCCGGTTGAAGGATGTGTTGGTGTTACTACGATGTATCAAGGTATGATAAATGAGGCTATCCAAGAATTAAATTATGTAAATATGGTACTAACTTATTATAAGCTAAATTACCCTTTACAACAACAAAATCTTGAACCTTACTTTTCAATTCATCATTCTTCTATGCCTTCTACTAGTACTCAAATTCAGAATTTTCCAAAATTTAATAATATTGGTGATGACATCCCTCATGATGTTACCATTAGCCCTATTGATACCAAAAAAGAGTTTGAGACATTTCAACAAGTGGATGTTGCAAATGGGGTACATAATTTAGAAACAAATTATATGGATGCAACTAGGGTTACACAATTGAGTGGTGTTAGCAATAGTGGTGGTGGCAATGCAATGGAAGAAAAACCTAACTTGATGGTAACACAAGGGCAATTTGATTTGAAAGGAAAGGGAAAATTATCAGGTATATATATTTGTTCTTTTAATTTTAATTATTTTTTATCTTTATTCTCATGTCAATATTTATTATGA 771 0.3281 MNFNRGDPTNKACAACKFQRRKCSKDCLLAPYFPADKPKIFSNAHRLFGVSNISKILKDVKEEYRGDAMKSIIFESDMRARFPVEGCVGVTTMYQGMINEAIQELNYVNMVLTYYKLNYPLQQQNLEPYFSIHHSSMPSTSTQIQNFPKFNNIGDDIPHDVTISPIDTKKEFETFQQVDVANGVHNLETNYMDATRVTQLSGVSNSGGGNAMEEKPNLMVTQGQFDLKGKGKLSGIYICSFNFNYFLSLFSCQYLL* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g3803 256 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
Mal6g3803 256 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 186 - -
Mal6g3803 256 Pfam Lateral organ boundaries (LOB) domain 12 108 IPR004883 -
Mal6g3803 256 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 8 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g3803 Mal-Chr6 110758254 110759024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal6g3803 9 116 AS2 family AT3G47870 57.407 1.25e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal6g3803 LOB 1.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g3803 - - mtr:MTR_6g011230 234.958